Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoceridae_20sp._20BV-2014_20[genbank_20GCA_5F001014425.1_202015- 05-28] 26,743 sequences; 41,711,596 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq11925 268 7e-66 seq26647 253 2e-61 seq4427 232 5e-55 seq25207 190 2e-42 seq26479 179 3e-39 seq1523 161 8e-34 seq20322 149 5e-30 seq17792 120 2e-21 seq25900 107 2e-17 >seq11925 Length=1675 Score = 268 bits (296), Expect = 7e-66 Identities = 521/763 (68%), Gaps = 6/763 (1%) Strand=Plus/Minus Query 551843 TGTTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCG 551902 ||| || || |||||||| || || ||| ||| | ||| | | |||| | || Sbjct 1487 TGTCGATGAATTTAAACGTAAGAATAAAAAAGATTTGAGTACTAATAAGAGAGCTTTGCG 1428 Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962 ||| | ||||| ||||| ||||| || || || | | || || || ||| | | Sbjct 1427 TCGCTTGAGAACAGCTTGTGAAAGGGCTAAGCGTACATTGTCTGCTTCAACCCAAGCTTC 1368 Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022 |||||| | ||||| | ||||||||| | |||| | |||| | || | || || Sbjct 1367 GATTGAAATTGATTCTCTGTTTGAGGGATTAGATTTTTATACATCGATGACCAGAGCACG 1308 Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082 || || || | | ||| | |||||||| ||||| |||||||| | ||| || Sbjct 1307 TTTCGAGGAATTAAACGCAGATTTATTTAGAAACACAATGGAACCAGTTTCAAAAGCATT 1248 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 | | ||| | || || || ||| | | || |||| ||||| || |||||||| || || Sbjct 1247 ACGTGATGCTAAAATGGACAAAGCTCAGGTTAATGACATTGTTCTGGTTGGTGGTTCCAC 1188 Query 552143 AAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAAT 552200 |||||| || ||| ||| || | | ||| | ||||| |||||| ||| | |||||| Sbjct 1187 AAGAATACCAAAAGTTCAAAAATTACTTCAAGAT-TTATT-CAATGGAAAAGATTTAAAT 1130 Query 552201 GAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTT 552260 || ||||||| ||||| |||||||| || || || || || |||||||| |||||| Sbjct 1129 AAATCAATTAATCCGGATGAAGCTGTTGCATACGGAGCTGCTATACAAGCAGCAATTCTT 1070 Query 552261 TCTGGACA-AACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATC 552319 ||| | || | | ||| | | ||| || || | | | ||||| |||| | || Sbjct 1069 CATGGTGATAAATCA-GAAGAGGTTCAAGATCTTCTTTTATTGGATGTAGCTCCATTGTC 1011 Query 552320 TCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTAT 552379 |||||| | ||||| | ||||||| | ||||| | | || | || ||||| || || Sbjct 1010 ACTTGGTATTGAAACCGCTGGAGGTGTAATGACGGTTTTAATTAAAAGGAATACAACAAT 951 Query 552380 TCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAAT 552439 ||| ||| || | | |||| | || ||| | ||||| ||| ||| || || Sbjct 950 TCCAACAAAACAAACCCAAACATTTACAACTTATGCTGATAACCAACCTGGAGTATTGAT 891 Query 552440 TCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAA 552499 ||| | | ||||| ||| | | | || ||||||||||||| | |||| ||| | Sbjct 890 TCAGGTGTACGAAGGTGAACGTGCAATGACAAAAGATAATAATCTTTTGGGTAAATTTGA 831 Query 552500 TTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATAT 552559 || || |||||||| ||||||||||| ||||| || ||||||||||| || ||||| Sbjct 830 ATTGTCTGGAATTCCTCCAGCTCCTCGTGGTGTACCACAGATTGAAGTTACATTTGATAT 771 Query 552560 CGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCT 552602 ||||| ||||| || || |||||| | ||| |||||||||| Sbjct 770 TGATGCGAATGGTATCTTAAATGTGTCAGCTGTTGATAAATCT 728 >seq26647 Length=1334 Score = 253 bits (280), Expect = 2e-61 Identities = 539/799 (67%), Gaps = 8/799 (1%) Strand=Plus/Minus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTT 551846 ||| ||| ||||| | || || |||||||| |||||| | | || ||||| | | Sbjct 1182 TGGTGATACTCATTTGGGAGGTGAAGATTTCGATAATCGTTTAGTGAATCAT--TTCACT 1125 Query 551847 GAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGT 551906 ||||| ||||| |||| |||| ||||| | ||| || | | ||| Sbjct 1124 GAAGAATTTAAGAGAAAGCACAAGAAGGATCTTAAAGGAAATGCACGTGCATTGAGACGT 1065 Query 551907 CTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATT 551966 |||||||| ||||| || | || || || || | || ||| |||| || | | ||| Sbjct 1064 CTAAGAACAGCTTGTGAGCGTGCAAAGAGAACTTTATCCTCTAGTACAGAAGCTTCAATT 1005 Query 551967 GAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTT 552026 ||| | ||| | | ||| || |||||| | || | || | || || ||| Sbjct 1004 GAAATTGATGCTCTTCATGATGGTGTTGATTTTTATTCAAAGATCACAAGAGCACGTTTT 945 Query 552027 GAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086 ||||| || ||| | || ||| ||| | ||||||| ||| ||| || | Sbjct 944 GAAGAAATGAACATGGATTTGTTCAGATCAACTTTACAACCAGTTGAAAAAGCATTGACT 885 Query 552087 GATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGA 552146 ||| | || || || ||| | | | | |||| |||| | ||||| ||||||||| | Sbjct 884 GATGCTAAAATGGACAAAGCAACAATTAATGATGTTGTTTTGGTTGGCGGATCTACACGT 825 Query 552147 ATTCCTAAAATTCGCGAAATGTTA--AGTTCTTATTTCAATGGTAAAAAATTAAATGAAA 552204 ||||| ||||||| |||||||| || | || ||| || || ||| |||||| | Sbjct 824 ATTCCAAAAATTCAAAAAATGTTACAAGAT-TTCTTT-AACGGAAAAGCTTTAAATCTGA 767 Query 552205 GTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 | ||||||||||||||||||| || ||||| || || |||||||||||||| | ||| Sbjct 766 GCATTAATCCAGATGAGGCTGTAGCTTATGGAGCTGCTGTTCAAGCAGCTATTTTAACTG 707 Query 552265 GACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTG 552324 | | || | || | ||| || || | ||||| ||||||||||| | || | | Sbjct 706 GTGATGGGAGTGCACAAATTCAAGATCTTCTTCTTGTTGATGTTACTCCATTGTCATTGG 647 Query 552325 GTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTT 552384 || | ||||||| ||| ||| ||||||| || | || || ||||| || ||||| | Sbjct 646 GTATTGAAACAGCTGGTGGTGTTATGACCAAATTGATTGAACGAAATGGTAGAATTCCAT 587 Query 552385 GTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAA 552444 | ||| || | ||| | || || |||||||||| ||||||||| ||||| Sbjct 586 GCAAACAACAGCAAACCTTTACAACTTACAGTGATAATCAAAATGCTGTTACTGTTCAAG 527 Query 552445 TTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAG 552504 | |||||||| ||| | | ||||| |||||||||| ||||| || ||||||||| Sbjct 526 TATTTGAAGGTGAACGTGCTATGACTAAGGATAATAATCTTCTTGGAACATTTAATTTAA 467 Query 552505 AAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATG 552564 || ||||| || || || | || ||||| ||||||||||||| || ||| | ||| Sbjct 466 CTGGAATTCCACCAGCACCAAGAGGTGTACCAAAAATTGAAGTTACATTTGATTTGAATG 407 Query 552565 CCAATGGAATTTTGAATGT 552583 | |||| ||| | ||||| Sbjct 406 CTGATGGTATTCTTAATGT 388 >seq4427 Length=1791 Score = 232 bits (256), Expect = 5e-55 Identities = 380/546 (70%), Gaps = 9/546 (2%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || |||||||| || |||||| ||||||||||||| ||||||| || ||| Sbjct 989 GGAATTGATTTAGGTACAACATATTCATGTGTTGGTGTTTATAAAAATGGACGTGTAGAA 1048 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGG---AA 550114 |||||||||||||| |||||||| | | ||| ||||| |||||| | || || | || Sbjct 1049 ATTATTGCCAATGACCAAGGTAATCGTATTACACCATCATATGTTGCATTTACCGCTGAA 1108 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 ||||| | | |||| ||||| || || ||||| || ||||| ||||| Sbjct 1109 GGTGAACGTCTTATTGGAGATGCTGCCAAGAATCAATTGACAACAAATCCAGAAAATACA 1168 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 ||||||||||||||||| | ||||| | | |||| | ||||||| ||| Sbjct 1169 GTTTTTGATGCTAAACGTATGATTGGTCGTGAATGGGCTGATGCAGCTGTTCAACATGAT 1228 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATT---GAAGCT 550291 |||| || || ||| || || | | ||||| ||||| | | | Sbjct 1229 TTGAAATTTTTCCCATTCGCTGTTATTGAAAAAAATACCAAACCACATATTCGTGTATCA 1288 Query 550292 ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATG 550351 || | |||| || |||| ||| |||||||| ||||||| ||||||||||| Sbjct 1289 ACAAGTCAAGG---TGATAAAGTTTTTGCACCAGAAGAAATTTCCGCTATGGTTTTAGGT 1345 Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411 |||||||| ||||||| || | | | || | |||| || |||| || |||| Sbjct 1346 AAAATGAAGGAAACAGCTGAAGCATATTTAGGAAAGAAAGTAACACATGCTGTTGTAACA 1405 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 |||||||| ||||| ||||| | |||||||||||||| ||||||||||| ||||||| Sbjct 1406 GTACCAGCTTATTTCAATGATGCTCAACGTCAAGCTACAAAAGATGCTGGTGTTATTGCT 1465 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531 || | |||||| | | ||||| |||||||| || |||||||| |||| ||||| | Sbjct 1466 GGTTTAAATGTTATGAGAATTATTAATGAACCAACAGCTGCTGCCATTGCTTATGGTTTA 1525 Query 550532 GATAAA 550537 |||||| Sbjct 1526 GATAAA 1531 >seq25207 Length=1187 Score = 190 bits (210), Expect = 2e-42 Identities = 197/258 (76%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 550270 TGGAAAACCTTATATTGAAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACA 550329 ||||||||| ||||||||| || | |||| || ||| |||| | |||||| | Sbjct 5 TGGAAAACCAAATATTGAAGTAACCTACAAAGGTGAGGTAAAAAAATTCTTTCCAGAAGA 64 Query 550330 AATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA 550389 ||| || ||||||||| | |||||||| ||| || |||| | | || || Sbjct 65 AATCAGTTCAATGGTTTTAGTTAAAATGAAGGAAAGCGCTGAAGCTTATTTGGGAAAACC 124 Query 550390 AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTAC 550449 ||||| ||| ||||| || |||||||| ||||| ||||| ||||||||||||||||| Sbjct 125 AGTTAAAAGTGCTGTAATTACAGTACCAGCTTATTTCAATGATTCACAACGTCAAGCTAC 184 Query 550450 TAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGC 550509 || ||||||||| |||| ||||| | ||||||||||||||||| |||||||| || || Sbjct 185 AAAGGATGCTGGAACTATTTCTGGATTGAATGTTCTTCGTATTATTAATGAACCAACAGC 244 Query 550510 TGCTGCACTTGCATATGG 550527 ||||||| |||||||||| Sbjct 245 TGCTGCAATTGCATATGG 262 Score = 89.7 bits (98), Expect = 4e-12 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 361705 ACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGC 361764 |||||| || | || ||||||||||||||| ||||| || || |||||| | ||| | Sbjct 263 ACCATATGCAATTGCAGCAGCTGTTGGTTCATTAATAATACGAAGAACATTCAATCCAGA 204 Query 361765 TATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGT 361824 || || ||||| || ||||||||||||| |||||| ||||| || || || || Sbjct 203 AATAGTTCCAGCATCCTTTGTAGCTTGACGTTGTGAATCATTGAAATAAGCTGGTACTGT 144 Query 361825 AATCACTGCTTTTTCAACTTGT 361846 ||| || || ||| |||| || Sbjct 143 AATTACAGCACTTTTAACTGGT 122 >seq26479 Length=1083 Score = 179 bits (198), Expect = 3e-39 Identities = 525/800 (66%), Gaps = 22/800 (3%) Strand=Plus/Minus Query 551964 ATTGAAGTAGATTCATTATTTGAGGGAATTGATTA-TAATACGCCTATTTCGAGGGCCAA 552022 |||||| | || ||||| ||||| || | ||||| | | | | | | | || || || Sbjct 1065 ATTGAAATTGAATCATTCTTTGAAGGTAATGATTTCTCAGAAACTT-TAACCAGAGCTAA 1007 Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTA-GAAAAACAATTGAACCAGTAGAACAAGTTT 552081 ||||||||| ||| | || || || | |||| | |||||||| || ||||| Sbjct 1006 ATTTGAAGA-ATTAAATATGGACTTGTTCCGTTCAACATTGAAACCAGTACAAAAAGTTA 948 Query 552082 TAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTA 552141 | |||| | | || ||||| | || |||||||||| | |||||||| || | Sbjct 947 TGGAAGATGCTGATATGAATAAAAAAGATGTTGATGAAATTGTTTTAGTTGGTGGTTCAA 888 Query 552142 CAAGAATTCCTAAAATTCGCGAAAT-GTTAAGTTCTTATTTCAATGGTAAAAAA---TTA 552197 || | ||||| ||| | | | | | ||||| || ||| |||||| || | | Sbjct 887 CACGTATTCCAAAAGTACAAGCATTAGTTAAAGAATTCTTTGG-TGGTAAGGAACCATCA 829 Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257 || || ||||||||||||| ||||||||||||||||| || | ||||| | | || Sbjct 828 CGTG---GTATTAATCCAGATGAAGCTGTTGCCTATGGTGCTGCTGTACAAGCTGGTGTT 772 Query 552258 CTTTCTGGACAAACTGATGAAAAACTACAAAA--TATTGTACTTGTAGATGTTACTCCTC 552315 | ||||| ||| || | |||| | |||||| | ||||||||| ||| Sbjct 771 TTATCTGG------TGAACAAGA--TACAGATGCTATTGTTTTATTAGATGTTAATCCAT 720 Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375 | | | || | ||||||||||| ||| ||||||| || | || | || || Sbjct 719 TGACAATGGGAATTGAAACAGTTGGTGGTGTTATGACAAAATTAATTCCACGTAACACAG 660 Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435 |||||| |||||||| | | || || || ||| ||||||||| | | |||| Sbjct 659 TTATTCCAACCAAAAAATCACAAATTTTCTCAACAGCTTCTGATAATCAACATACCGTTA 600 Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495 |||||||| | | |||||| ||| | | | || ||||| ||| || | | |||| | Sbjct 599 CAATTCAAGTATATGAAGGTGAACGTCCAATGACAAAAGACAATCATTTATTAGGTAAAT 540 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 || ||||| |||||||| || || || | || | || |||||||||||| | || | Sbjct 539 TTGATTTAACTGGTATTCCACCAGCACCAAGAGGTATTCCACAAATTGAAGTTTCATTTG 480 Query 552556 ATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAACAAGAGTA 552615 | || ||||||||||| ||| | | || ||||| |||||| || | || || Sbjct 479 AAATTGATGCCAATGGTATTCTTCAAGTATCTGCTGAAGATAAAGGTACCGGTAATCGTG 420 Query 552616 AAAATATTACTNNNNNNNATAATCGTGGTAGATTTACTGATGAACAAATTAAACGTATGG 552675 |||| ||| || ||| |||||| || ||| | ||| | |||||| Sbjct 419 AAAAGATTGTCATCACAAATGATCAAAATAGATTAACACCAGAAGATATTGAGCGTATGA 360 Query 552676 TCGAAGAAGCTAAAGAATTTGAAGAAGCTGATAATAAGAGAAAATCTGCTGTCGATGCCA 552735 || |||| ||| || |||| | |||| |||||| || ||| ||| || || | Sbjct 359 TCAAAGATGCTGAAAAATTCGCTGAAGATGATAAGAAATTAAAGGAACGTGTTGAAGCAA 300 Query 552736 AGAATGATTTAGAAAATTAT 552755 ||||| || |||| |||| Sbjct 299 GAAATGAATTGGAAAGTTAT 280 >seq1523 Length=2040 Score = 161 bits (178), Expect = 8e-34 Identities = 372/549 (68%), Gaps = 21/549 (4%) Strand=Plus/Plus Query 428062 TATATCTCGTGGATTACATGGTGCTATTTTAGTTGAATAACCGGTTCCAATTCCTTCTGT 428121 || ||||| ||||||| | || ||||| ||||| ||||||| ||||| ||||||| Sbjct 1197 TAAATCTCTTGGATTAAAATTTGGAATTTTTGTTGACCAACCGGTACCAATACCTTCTGA 1256 Query 428122 ACCATTTACAAGAATCATTGGAATGACTGGTGCATAATATTGTGGTTCAATCATTTTATT 428181 |||||| || | |||||||||||| | |||| ||| | ||||||||| ||| ||| Sbjct 1257 ACCATTAACTAAAATCATTGGAATAATTGGTATATACCAAACTGGTTCAATTCTTTGATT 1316 Query 428182 ATCTTCATATTGTAAATG-TAA-AAT--ATCAAAATCATGCTCGAT-AAATAtttttttA 428236 ||| || ||| | ||| ||| ||| |||| ||||| | ||| |||||| Sbjct 1317 ATCATCTGTTTG-ATATGCTAACAATGGATCA---TCATG-TGGATGAAATATAAGACGT 1371 Query 428237 GCCAATT----CATCAAGTTGTGTAAAGATATATCTTGCGCTTGCGGAATCTTTACCTCC 428292 | ||| ||||| |||||| ||||| | | || || || ||||| || Sbjct 1372 GTTAATGGTGACATCAT----TGTAAAAATATAACGAGGACTAGCACTGTCCTTACCACC 1427 Query 428293 TGACATTCTAGTTCCAAATTGTCCATTAGGCATCAATAAATTAATATTATTACTTCCCAC 428352 | | ||| || |||||||| ||| | || || |||||||||||||| ||||| || || Sbjct 1428 ACATAATCTTGTACCAAATTGACCACTTGGTATTAATAAATTAATATTGTTACTACCAAC 1487 Query 428353 ATAATTTTGGGCCATATTAACAATGGTACTAGTTAAGGATTGTTCACCATGATGATATTT 428412 |||||| || || | ||||||||| || | | | ||| |||||| ||||||||| Sbjct 1488 ATAATTCTGTGCAAGATTAACAATTGTTCCACAAAGTGATACTTCACCGTGATGATATGC 1547 Query 428413 AGTTCTTTTTGAAACTGCACCTTGTAATTCTGATACCTTTATTTCTTCTTTATAAATACC 428472 | ||| | || || ||| |||| || || || | ||| ||||| | ||| Sbjct 1548 TGACATTTCAGCAATTGAACCAGCCAATTGTGCAACTTTAACTTCACGTTTATCATTACG 1607 Query 428473 TTCTTCTACTGATCCATAAAATACTTTGCGTTGTGATGGTTTGAATCCATCCATAATATT 428532 || | ||| || | |||||||| |||||| |||||| || ||||| | | || Sbjct 1608 TT-TAATAC--ATGTGAATAATACTTTACGTTGTCCTGGTTTTAAACCATCAACACTACA 1664 Query 428533 AGGTATAGATCTTAAATTATCATCCACTGAGAATGATATTAGTTCTTGATGAATGAAATC 428592 | || |||| | ||||||| | ||||||| | | || ||| || || ||||| Sbjct 1665 TGAAATTGATCGAACATTATCAGCATTTGAGAATAAAACTAATTCCAAATTAACAAAATC 1724 Query 428593 ATAATATGA 428601 | ||| || Sbjct 1725 AGCATAAGA 1733 >seq20322 Length=1593 Score = 149 bits (164), Expect = 5e-30 Identities = 378/569 (66%), Gaps = 32/569 (6%) Strand=Plus/Minus Query 549985 CAAAGTAGCT---ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCA 550041 ||||| |||| || ||||| ||||| || || ||| || ||||||| |||| | | Sbjct 989 CAAAGGAGCTGTTATTGGTATCGATTTGGGTACAACAAATTCATGTGTTGCTGTTATGGA 930 Query 550042 AAATGGTAAAGTTG---AAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTA 550098 | || ||| | || | |||| |||| | ||||| | || || ||||| | Sbjct 929 A---GGAAAACAAGCCAAAGTAATTGAAAATGCTGAAGGTGCACGTACAACACCATCACA 873 Query 550099 TGTTTCTTTCACGGAAACTG---AACATTTAGTTGGTGATGC-AGCAAAATATCAAGCCA 550154 |||| | ||| | || || ||| |||||||||| |||| ||| ||| ||| || Sbjct 872 TGTTGCATTCTCAAAAGATGGTGAACGTTTAGTTGGT-ATGCCAGCTAAACGTCAGGCTG 814 Query 550155 CTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATG 550214 | ||| | | ||||| ||| || | ||||||||||||||| | ||||| | | Sbjct 813 TTACAAATTCAGCAAATACATTTTATGCAACAAAACGTTTAATTGGACGTCGTTTTGAAG 754 Query 550215 ATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTC---TG 550271 || | ||| | ||||||||| | | | |||||||||| | || || Sbjct 753 ATGCTGAAGTTAAAAAAGATATGAAAATGTTATCATATAAAATTGTTAAAGCATCAAATG 694 Query 550272 GAAAACCTTATATTGAAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAA 550331 | | | | | ||| ||| ||| |||| | ||||||| |||| Sbjct 693 GTGATGCATGGGTACAAGGTACAGATGG---------TAAAGTTTATTCACCAAGTCAAA 643 Query 550332 TTT---CATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAG 550388 || ||| ||| |||| | |||||||| ||||||| || | | | | | Sbjct 642 TTGGTGCATTTAT---TTTAGTTAAAATGAAGGAAACAGCTGAAGCATATTTAAATACAC 586 Query 550389 AAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTA 550448 ||||| |||| || ||||||||||||||||||||||||| |||||| | ||||| | Sbjct 585 CAGTTAAAAATGCTGTTGTAACTGTACCAGCATATTTTAATGATTCACAAAGACAAGCAA 526 Query 550449 CTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTG 550508 | ||||||||||||| ||| |||| | |||||||||||| |||| |||||||| || | Sbjct 525 CAAAAGATGCTGGACAAATTTCTGGTTTGAATGTTCTTCGTGTTATTAATGAACCAACAG 466 Query 550509 CTGCTGCACTTGCATATGGACTTGATAAA 550537 |||||||| | || || || | |||||| Sbjct 465 CTGCTGCATTAGCTTACGGTATGGATAAA 437 Score = 100 bits (110), Expect = 2e-15 Identities = 117/156 (75%), Gaps = 3/156 (2%) Strand=Plus/Plus Query 361691 GTTTTACTTCCAAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATA 361750 |||||| |||| ||| |||||||||| ||||||||||||||| ||||| | || | Sbjct 435 GTTTTA--TCCAT-ACCGTAAGCTAATGCAGCAGCTGTTGGTTCATTAATAACACGAAGA 491 Query 361751 ACATTGAGTCCCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAA 361810 ||||| | || | |||| | |||||| || ||||| | ||||| |||||||||| Sbjct 492 ACATTCAAACCAGAAATTTGTCCAGCATCTTTTGTTGCTTGTCTTTGTGAATCATTAAAA 551 Query 361811 TATGCAGGAACAGTAATCACTGCTTTTTCAACTTGT 361846 ||||| || ||||| | || || |||| |||| || Sbjct 552 TATGCTGGTACAGTTACAACAGCATTTTTAACTGGT 587 >seq17792 Length=2801 Score = 120 bits (132), Expect = 2e-21 Identities = 256/378 (68%), Gaps = 21/378 (6%) Strand=Plus/Plus Query 394006 TGTCACAATTTCATCAAATGTTAAATTCATTGCAATAATTTGTGGTAGTCCCACTTCATT 394065 ||| |||| ||| |||||||||||| |||||| | || | || |||| || Sbjct 1696 TGTAACAAGTTCTGGAAATGTTAAATTTTGTGCAATTGACCGAGGAACACCAACTTGATC 1755 Query 394066 AAGAGCAATATTTGGATCCGAGGTAATAACTGTACGACCTGACATATCCACACGTTTTCC 394125 || | | ||||||||| | |||||||| ||||| |||| | ||| ||||||||||| Sbjct 1756 AATACGTAAATTTGGATCTGGTGTAATAACGGTACGTGCTGAAAAATCAACACGTTTTCC 1815 Query 394126 CATAAGATTTCCACGAATTCTACCTTCTTTACCTCGTAATCGTGACGACAAATCTTTTGT 394185 ||| | ||| |||||||| | ||||||||||| || ||||| | |||| Sbjct 1816 CATTAAATTACCACGAATACGTCCTTCTTTACCCTTCAAACGTGATTTTATTGCTTTAAG 1875 Query 394186 TAAttttttatttttttGCTGTGATCTTGGTAATCCTGATATATCGTTCGCAAAAAATGT 394245 | ||| | ||||||| || |||||| | || | ||||| || ||| |||||| Sbjct 1876 TGGTTTACCAGATTTTTGCATTGCTCTTGGCATACCCGGCATATCATTATCAACAAATGT 1935 Query 394246 TGCAACATGATATTGTAATAACATAAAA---TCATCATTAACACTA--TATTTTACCA-A 394299 |||||||||| | ||||| | ||| | ||| || ||||| | | | |||| | Sbjct 1936 TGCAACATGAAACTGTAACATTTTAATATTCTCAGCAATAACATGAGCTGCTGCACCAGA 1995 Query 394300 AGAACCATCTCCTTTGGAATTTTTTAAATTTTCGTTATT---TTTGATAATATCTACTAA 394356 || ||| || |||||||| ||| ||||| ||| |||||||| | | Sbjct 1996 TGATTCAT-TC--------TTTTTTAA---TTCATTATTTGCTTTTATAATATCAGCAAG 2043 Query 394357 TTTATGAGTTAAATCGTC 394374 |||||| |||||||| || Sbjct 2044 TTTATGTGTTAAATCATC 2061 >seq25900 Length=2493 Score = 107 bits (118), Expect = 2e-17 Identities = 187/272 (69%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 344422 AATGGAGTTGCATCTCCATATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCA 344481 ||||| |||||||| ||| | | |||||| | | || | |||||| | | ||||||| Sbjct 1157 AATGGTGTTGCATCACCAATTTCACCTTTATTCGAACCTAATTTACCCTGAAGACATTCA 1216 Query 344482 ATTAATTGACCTATCGTCATACGTTTGGGCATACAATTAGGATTAATAATAATATCAGGA 344541 ||||| ||||| || ||||||||| || || || |||||||| |||||||| || Sbjct 1217 ATTAAATGACCAATTGTCATACGTGATGGAATGGCATGCGGATTAATTATAATATCGGGT 1276 Query 344542 ATTAATCCTGATTTTGTGAATGGAAGATCTGCACGATGAATTTTAAATCCAACTGTTCCT 344601 ||| |||| ||| ||||| | ||| | || | ||| ||| ||||||| Sbjct 1277 GTTAGTCCTTCACATGTAAATGGCATATCCTCCTGACGGTACATAATTCCGCATGTTCCT 1336 Query 344602 TTTTGTCCAGCTCTTGATGAGAATTTATCACCTACTGCTGGAATTCTTTCTGATCTAACT 344661 ||||||||| | ||| | ||||||||||| | | ||| | | | |||| | || Sbjct 1337 TTTTGTCCATGGCGTGAAGCAAATTTATCACCAATTTGTGGTGTACGTACTGAACGCACC 1396 Query 344662 CGAATCTTAATAATAGGATATCCATCATTATT 344693 | ||||||| || ||| || ||| |||| Sbjct 1397 CTAATCTTACAAAATTTATAACCTTCACTATT 1428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4027881709549070