Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoceridae_20sp._20BV-2014_20[genbank_20GCA_5F001014425.1_202015- 05-28] 26,743 sequences; 41,711,596 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq15244 113 4e-20 >seq15244 Length=2162 Score = 113 bits (124), Expect = 4e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 ||||| |||||||| |||||||| || || || ||||||||||||||||| || ||| Sbjct 3 GCAAAGATCAAACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATCTTAGCTTTG 62 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 ||| |||| | ||| || || | ||| || ||||| |||| || || || || | |||| Sbjct 63 ACATTTTCGATAGTATCGGAGGGTTCGACCTCAAGGGTGATGGTCTTCCCTGTGAGAGTT 122 Query 101453 TTTACAAATATCTGCAT 101469 || ||||| |||||||| Sbjct 123 TTCACAAAAATCTGCAT 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396149240857251