Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoceridae_20sp._20BV-2014_20[genbank_20GCA_5F001014425.1_202015- 05-28] 26,743 sequences; 41,711,596 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq15244 95.1 2e-14 >seq15244 Length=2162 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 193224 GCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTT 193283 ||||| || || | |||||||| || || || |||||||||||||| || || | ||| Sbjct 3 GCAAAGATCAAACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATCTTAGCTTTG 62 Query 193284 ATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTT 193343 | |||| ||||||||||| | || || || || || || || || ||||| || ||| Sbjct 63 ACATTTTCGATAGTATCGGAGGGTTCGACCTCAAGGGTGATGGTCTTCCCTGTGAGAGTT 122 Query 193344 TTTACAAATATTTGCATTTT 193363 || ||||| || ||||| || Sbjct 123 TTCACAAAAATCTGCATATT 142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899353656779760