Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoceridae_20sp._20BV-2014_20[genbank_20GCA_5F001014425.1_202015- 05-28] 26,743 sequences; 41,711,596 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq22772 118 9e-22 >seq22772 Length=1572 Score = 118 bits (130), Expect = 9e-22 Identities = 95/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 135649 AGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTT 135708 |||||| |||||||| ||| | ||| ||||||||||||| |||||||| || ||| || Sbjct 1325 AGGTTGCATGTGGTCAATTGGAGGTTTACACGATCAAGGTTGGAAGGAACGATCAGTTTT 1266 Query 135709 TGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGTAAAT 135763 ||| || ||||| |||||||||||| | || |||| |||||||||| |||| ||| Sbjct 1265 TGGTAAAATTCGTTATATGAACTATCAGGGATGTAAAAGAAAATTTGATGTTAAT 1211 Score = 118 bits (130), Expect = 9e-22 Identities = 95/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 135649 AGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTT 135708 |||||| ||| |||| ||| | ||| ||||||||||||| |||||||| || | ||| || Sbjct 1497 AGGTTGCATGGGGTCAATTGGGGGTTTACACGATCAAGGTTGGAAGGAACGAACAGTTTT 1438 Query 135709 TGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGTAAAT 135763 ||| || ||||| |||||||||||| | || |||| |||||||||| |||| ||| Sbjct 1437 TGGTAAAATTCGTTATATGAACTATCAGGGATGTAAAAGAAAATTTGATGTTAAT 1383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434773012215360