Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoceridae_20sp._20BV-2014_20[genbank_20GCA_5F001014425.1_202015- 05-28] 26,743 sequences; 41,711,596 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq15244 116 9e-21 >seq15244 Length=2162 Score = 116 bits (128), Expect = 9e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||||||||||||||| || || |||||||| ||||| ||| ||| || Sbjct 136 CAGATTTTTGTGAAAACTCTCACAGGGAAGACCATCACCCTTGAGGTCGAACCCTCCGAT 77 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || |||||| |||||||| || |||||||| ||||| || || || ||| Sbjct 76 ACTATCGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATCCCACCAGATCAACAA 17 Query 178044 CGACTTATCTTCGC 178057 || | ||||| || Sbjct 16 CGTTTGATCTTTGC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203318747899142