Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq34 96.9 4e-15 seq111 95.1 1e-14 >seq34 Length=2688268 Score = 96.9 bits (106), Expect = 4e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 16778 CCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAG 16837 || |||||| | || || ||||||||||| || || || || ||||| | | ||| Sbjct 1148908 CCGAGTTCGCGCAATAGCCTGTCCGCTACAAACTCGATGTACTGACACATAAGCTTACAG 1148967 Query 16838 TTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACC 16897 ||||| || || | || || ||||| |||||||||||| ||| || || | || Sbjct 1148968 TTCATGCCAATCATTTCAACTGGCAGAGCGTCCGTCAAAAATTCTTGTTCAATTGCTACT 1149027 Query 16898 GCTTCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAAC 16957 || ||||||||||| | || ||||| | | ||| | || || ||||||||| Sbjct 1149028 GCATCCTTAATAATTGAAATTACACGTTCTTGTGTTGGTTTTTGAACAATGTGTTTAAAC 1149087 Query 16958 ATCAGACATGCGAAATCGCAATGTAATCCCT 16988 || || || || || || ||||||||||||| Sbjct 1149088 ATAAGGCAGGCAAAGTCACAATGTAATCCCT 1149118 >seq111 Length=4850898 Score = 95.1 bits (104), Expect = 1e-14 Identities = 131/178 (74%), Gaps = 4/178 (2%) Strand=Plus/Minus Query 119861 CCCACGTATCCGTTGGGATCCGTTCCATCTA-ACTCGTATTTATCGTTTAAGTAGATACA 119919 || || || || |||||||| ||||||| | ||| ||||||||| || || || || | Sbjct 3861697 CCAACATAACCATTGGGATCTCTTCCATCCATACT-GTATTTATCATTCAAATAAATTGA 3861639 Query 119920 GACGCTTAAC-GCACTTTCAGGAGTCTCGCTCCATTCCAGTAtttttttAGCCCAGTACA 119978 | || | || || ||| || | | ||||||| || |||||||| |||||||||| Sbjct 3861638 C-CACTCGAGTGCTTCTTGAGGTGTTTTGGTCCATTCTAGAATTTTTTTGGCCCAGTACA 3861580 Query 119979 TACGTAAGTATCCATGCATTTTACCTTCACGAACCATTTGAAGTTGTGCGGCGTTCCA 120036 ||||||| | ||||| ||||||||||| |||| ||| | || ||| || ||||| Sbjct 3861579 TACGTAAAAAGCCATGAATTTTACCTTCTTTTACCAATTGTATTTCTGCAGCATTCCA 3861522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543290452760