Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq34 206 3e-48 seq111 86.0 6e-12 >seq34 Length=2688268 Score = 206 bits (228), Expect = 3e-48 Identities = 379/548 (69%), Gaps = 18/548 (3%) Strand=Plus/Plus Query 16238 ATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATC 16297 || ||||| ||| ||||| | ||||||||| ||||| ||||| ||||| ||||| Sbjct 1149200 ATTAGTTCATTGCTGAAAGTAAGTCCTGGCATTAAACCTCGCTTCTTCAACCAAAATATG 1149259 Query 16298 GCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCC 16357 |||||||| || ||||| || || ||||||| ||||||||| || | ||| || Sbjct 1149260 GCAGCAAAACTACCACTGAAGAAAATTCCTTCAACAGCTGCAAAAGCTATAACTCGCTCA 1149319 Query 16358 GCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATA 16417 || | |||||| |||| || ||||| ||| |||| | ||||| | | | | Sbjct 1149320 GCAAATGTAGCACTCTTATGACTGATCCAGTTCATAGCCCAGTTAGCTTTCTTGGTAACA 1149379 Query 16418 CAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGA-AT--ATCGATTATA 16474 ||| | ||||| || || || ||||| | || | |||| || ||| | || Sbjct 1149380 CAAGGTAGAGTTTCAATTGCATTGAACAAGTAGTCCCT---CTGAGATGGATCAGTAATG 1149436 Query 16475 TACGTATCAATCAGTAAACTG--TACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAA 16532 || |||||||| || || || |||||||||||||| | || || ||||||| || | Sbjct 1149437 TAGGTATCAATAAG--AAGTGAATACATTTCTGAGTGCACATTTTCCATGGCTACTTGGA 1149494 Query 16533 ATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGT 16592 | ||||||||||| |||||||| | | ||| |||||| | ||||| || | || | Sbjct 1149495 AGCCATAGAAGCAGCGAGCCTCAGTGACTTGAACTTCCTGGCTGAATCGCTCAACGAGAT 1149554 Query 16593 TCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATT 16652 | ||||| || || || ||| |||||||| || || |||| || ||| |||| || Sbjct 1149555 TTTCATTGACAATGCCATCAGAGGCAGCAAAGAATGCTAATACATGAGAAATAAAATGTT 1149614 Query 16653 TTTCGTCAGATGTAA---GAATATG-CCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708 | |||| ||| | | | || |||||| | | ||| || |||| || |||||| Sbjct 1149615 TCTCGT----TGTCATTCAACTTTGCCCAATCGTGCATATCCTTTGATAAGTCTACTTCT 1149670 Query 16709 TCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGT 16768 || ||||||||| |||| | || || || ||||| | |||||||||| |||| Sbjct 1149671 TCGACCGTCCAAAATGAAGCCTCAGCTTTCTTGTACATGTGCCAAATATCAGGCCATTGA 1149730 Query 16769 ATGGGAAA 16776 |||||||| Sbjct 1149731 ATGGGAAA 1149738 >seq111 Length=4850898 Score = 86.0 bits (94), Expect = 6e-12 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 119014 CCCACGTATCCGTTGGGATCTGTTCCGTCTA-ACTCGTACTTATCGTTTAAGTAGATACA 119072 || || || || ||||||||| |||| || | ||| ||| ||||| || || || || | Sbjct 3861697 CCAACATAACCATTGGGATCTCTTCCATCCATACT-GTATTTATCATTCAAATAAATTGA 3861639 Query 119073 GACGCTTAAC-GCACTTTCCGGAGTCTTACTCCATTCCAGTAtttttttAGCCCAGTACA 119131 | || | || || || || || ||||||| || |||||||| |||||||||| Sbjct 3861638 C-CACTCGAGTGCTTCTTGAGGTGTTTTGGTCCATTCTAGAATTTTTTTGGCCCAGTACA 3861580 Query 119132 TACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGAAGTTGTGCGGTGTTCCATA 119191 |||||||| | || || |||||||| || || | || || | || ||| | ||||| | Sbjct 3861579 TACGTAAAAAGCCATGAATTTTACCTTCTTTTACCAATTGTATTTCTGCAGCATTCCACA 3861520 Query 119192 GAGGATCGTGTGT 119204 || ||| ||||| Sbjct 3861519 GATCATCATGTGT 3861507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511412117813240