Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq211 105 5e-18 >seq211 Length=1509898 Score = 105 bits (116), Expect = 5e-18 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 18894 GTTATAGATACAATTAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAAT 18953 || || ||||||||| || || ||||| || |||| ||||| || |||||||| Sbjct 53053 GTAATTGATACAATTCTAAATAAACCAGATGATAGAAGAATCATTATGTCAGCTTGGAAT 53112 Query 18954 CCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTT 19013 |||| || || || |||||| || || || ||||| | || ||||||||||||| Sbjct 53113 CCAATTGACATTCCAATAATGGCTCTCCCACCTTGTCATGCATTGGTTCAGTTTTACGTT 53172 Query 19014 GCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTA 19073 || || || ||| | || || ||| | || || ||| | || ||||| ||||| ||| Sbjct 53173 GCTAATGGAGAACTTTCTTGTCAACTTTATCAAAGAAGTGCTGACATGGGACTTGGTGTA 53232 Query 19074 CCGTTCAACATTGCTGGATATGCACTTCTT-ACCTACATAGTAGCGCATGTTACA 19127 || || || || ||| |||| | ||| || || || || |||| ||| ||||| Sbjct 53233 CCATTTAATATAGCTTCATATTC-CTTATTGACATATATGATAGCTCATATTACA 53286 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 18614 ATTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATG 18673 ||||||||||||||| |||||| | || |||||| | | || || ||||| | | || Sbjct 52687 ATTTCCTCTTTTAACGACAAAGAGAGTATTTTGGCGCGGAGTGGTCGAAGAACTACTTTG 52746 Query 18674 GTTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATATGGGA 18733 |||||| || ||||| || |||||||| | | | ||||||||| ||||||||||| Sbjct 52747 GTTTATTAAGGGTTCAACGAATGCCAAAGAATTATCTGATAAAGATATTCACATATGGGA 52806 Query 18734 TATATACGGATCGAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACACACGGGGGA 18793 | | | ||| | ||||| || || ||| || | ||| | || || Sbjct 52807 TGCTAATAGCTCGCGAGAATTTTTAGATTCCTGTGGTTTTACGGATAGAGAAGTTGGCGA 52866 Query 18794 CCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATAT 18842 | || || |||| || || |||||||| ||||||||||| ||||| Sbjct 52867 TTTAGGACCGGTTTATGGATTTCAGTGGAGGCATTTTGGAGCAAAATAT 52915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399502261783065