Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq211 143 2e-29 >seq211 Length=1509898 Score = 143 bits (158), Expect = 2e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 102037 ATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATC 102096 ||||| |||||| ||||||||||||||||||||||| || ||||| | ||| || | || Sbjct 52915 ATATTTTGCTCCAAAATGCCTCCACTGAAATCCATAAACCGGTCCTAAATCGCCAACTTC 52856 Query 102097 TCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTG 102156 ||| || ||||||| |||||||||| || || | ||| |||||||| ||||| Sbjct 52855 TCTATCCGTAAAACCACAGGAATCTAAAAATTCTCGCGAGCTATTAGCATCCCATATGTG 52796 Query 102157 CACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTC 102216 | | | |||| |||||| | || || || | |||||||| | ||||| Sbjct 52795 AATATCTTTATCAGATAATTCTTTGGCATTCGTTGAACCCTTAATAAACCAAAGTAGTTC 52736 Query 102217 TTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAAT 102265 ||| || || || | ||||||||||||||| || |||||||| |||||| Sbjct 52735 TTCGACCACTCCGCGCCAAAATACTCTCTTTGTCGTTAAAAGAGGAAAT 52687 Score = 131 bits (144), Expect = 1e-25 Identities = 183/254 (72%), Gaps = 2/254 (1%) Strand=Plus/Minus Query 101750 TTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACT 101809 || || | |||||| ||||| | || || | ||||| ||| || |||||||| || Sbjct 53288 TTTGTAATATGAGCTATCATATATGTCAATAAGGAATATGAAGCTATATTAAATGGTACA 53229 Query 101810 CCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACA 101869 || | ||||| ||||| ||||||||| |||||||| ||||| | ||||| | || Sbjct 53228 CCAAGTCCCATGTCAGCACTTCTTTGATAAAGTTGACAAGAAAGTTCTCCATTAGCAACG 53169 Query 101870 TAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTC 101929 ||||| ||| ||| |||||||||| || | ||||| | |||||||| |||| Sbjct 53168 TAAAACTGAACCAATGCATGACAAGGTGGGAGAGCCATTATTGGAATGTCAATTGGATTC 53109 Query 101930 CAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTA-TAGTATCAATCAACTG 101988 ||||| |||| | || |||||||| | ||||| ||| | | |||||||| | || Sbjct 53108 CAAGCTGACATAATGATTCTTCTATCA-TCTGGTTTATTTAGAATTGTATCAATTACTTG 53050 Query 101989 TTTTAATTGGTCAA 102002 ||||||||| |||| Sbjct 53049 TTTTAATTGATCAA 53036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361249628218607