Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq34 206 3e-48 seq89 140 3e-28 seq256 113 5e-20 seq336 84.2 2e-11 >seq34 Length=2688268 Score = 206 bits (228), Expect = 3e-48 Identities = 393/571 (69%), Gaps = 12/571 (2%) Strand=Plus/Minus Query 116603 CGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAG 116662 || |||||||| || ||||| |||| || || || |||| ||||||||| || || ||| Sbjct 1149750 CGTTTCGTGATCTTTCCCATTCAATGGCCTGATATTTGGCACATGTACAAGAAAGCTGAG 1149691 Query 116663 GCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGC 116722 || || || ||||| ||||| || || ||| | || ||||| | | ||| |||| Sbjct 1149690 GCTTCATTTTGGACGGTCGAAGAAGTAGACTTATCAAAGGATATGCACGATTGGGCAAAG 1149631 Query 116723 TTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGAC 116782 ||||| ||||||||| ||||| || || || | || || || || ||| || Sbjct 1149630 TTGAATGACAACGAGAAACATTTTATTTCTCATGTATTAGCATTCTTTGCTGCCTCTGAT 1149571 Query 116783 GGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCG 116842 ||||| ||||| || ||||| || ||||| ||| ||||| || || || | ||||| Sbjct 1149570 GGCATTGTCAATGAAAATCTCGTTGAGCGATTCAGCCAGGAAGTTCAAGTCACTGAGGCT 1149511 Query 116843 CGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACC 116902 || |||||||| ||||| || | |||||||| || |||||||| ||||||||||| Sbjct 1149510 CGCTGCTTCTATGGCTTCCAAGTAGCCATGGAAAATGTGCACTCAGAAATGTATTCACTT 1149451 Query 116903 CTCATCGACACGTACGT--GCGCTC---TTCGGAGGAGAAGCTCCGTTTGTTGAACGCCA 116957 || || || || ||| | | || || |||| || || | ||||| || || | Sbjct 1149450 CTTATTGATACCTACATTACTGATCCATCTCAGAGG-GA--CTAC--TTGTTCAATGCAA 1149396 Query 116958 TCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATC-GCCGGC 117016 | || || | || || || | |||| || | ||||| || ||||||| | | Sbjct 1149395 TTGAAACTCTACCTTGTGTTACCAAGAAAGCTAACTGGGCTATGAACTGGATCAGTCATA 1149336 Query 117017 AGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTT 117076 |||| || | || | ||||| | | || || || || || || || | ||||| Sbjct 1149335 AGAG-TGCTACATTTGCTGAGCGAGTTATAGCTTTTGCAGCTGTTGAAGGAATTTTCTTC 1149277 Query 117077 TCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACT 117136 || ||||| || |||||||||||| | ||||| || || | ||||| || || ||| Sbjct 1149276 AGTGGTAGTTTTGCTGCCATATTTTGGTTGAAGAAGCGAGGTTTAATGCCAGGACTTACT 1149217 Query 117137 TTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||||||| || || || || | || |||| Sbjct 1149216 TTCAGCAATGAACTAATTTCTCGCGATGAGG 1149186 >seq89 Length=3244750 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| || || || ||||||||||| | || ||||||||| || Sbjct 1691664 ATGCAAATTTTTGTCAAAACTCTGACAGGTAAAACCATCACACTTGAGGTCGAAGCCTCC 1691605 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| || ||||| | |||| ||||||| |||||||| || || ||| | || || Sbjct 1691604 GACACAATTGAAAACG-TGAAGGCCAAAATTCAAGACAAAGAAGGAATTCCCCCAGATCA 1691546 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || ||||| | ||| || |||||||| || |||| ||||| | |||||||| Sbjct 1691545 ACAGCGTCTCATTTTCGCCGGAAAACAGCTTGAAGACGGTCGCACTTTGTCAGACTACAA 1691486 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 || || |||||| | || |||||| |||| ||||| | || || ||| Sbjct 1691485 TATTCAAAAGGAGTCGACACTGCATTTAGTATTGCGTCTTAGAGGAGGC 1691437 Score = 129 bits (142), Expect = 6e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||||||||| || || || || ||||| || || ||||||||||| | || ||||| || Sbjct 1692124 AAAAATGCAGATCTTTGTGAAGACGCTGACTGGTAAAACCATCACATTGGAGGTCGAGGC 1692065 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | ||| | |||| ||| |||| |||||||||||||||||| | || Sbjct 1692064 ATCCGACACCATTGAAAATGTTAAGGCAAAGATTCAAGACAAAGAGGGCATCCCCCCAGA 1692005 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || | |||| || || || ||||| || || | |||||| | || || Sbjct 1692004 CCAGCAGAGATTGATCTTTGCAGGAAAGCAGCTCGAAGATGGACGCACCTTGTCTGATTA 1691945 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| |||||||| |||| || || || || | | ||||| || || Sbjct 1691944 TAACATTCAGAAGGAATCCACACTCCACCTTGTACTCAGATTGAGAGGTGG 1691894 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || || || ||||||||| | || || ||||| || Sbjct 1690046 ATGCAGATCTTTGTCAAGACATTGACAGGAAAGACCATCACCTTGGAAGTGGAAGCTTCC 1689987 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| |||||| || |||| |||||||| ||||| || | || ||| Sbjct 1689986 GACACTATTGAAAATGTCAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCAGATCAG 1689927 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || || ||||||||||| || | ||||| || ||||||||| Sbjct 1689926 CAGCGTCTTATCTTTGCTGGTAAACAGCTGGAAGATGGACGCACACTGTCTGACTACAAC 1689867 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | || || || Sbjct 1689866 ATCCAGAAGGAGTCGACTCTTCA 1689844 >seq256 Length=3517054 Score = 113 bits (124), Expect = 5e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| || || ||||| ||||| || |||||||||||| | || || || || Sbjct 131014 AAAATGCAAATCTTTGTGAAAACACTCACAGGAAAAACCATCACCCTTGAGGTTGATGCG 130955 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||||| | ||| |||||| ||||| | || || || || || || | ||| Sbjct 130954 GCTGACAGCATTGAAAATGTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCCAGAC 130895 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 |||||| || | |||| ||| || ||||| |||| || | || || | ||| ||| Sbjct 130894 CAGCAAAGATTGATCTTCGCCGGAAAACAATTGGAAGATGGACGTACATTGTCCGATTAC 130835 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || || |||||||| | || || ||| |||| Sbjct 130834 AATATTCAGAAGGAATCTACCCTTCATTTAGT 130803 >seq336 Length=3726090 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || || || ||||| | || || ||||| || ||| | || ||||||||| Sbjct 1528572 AAAATGCAGATCTTTGTCAAAACTTTGACTGGTAAAACTATTACCTTGGAGGTCGAAGCC 1528513 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | || | | ||| |||||| ||||| | || || || || || || |||| Sbjct 1528512 TCTGATACTATTGAAAATGTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCCGGAT 1528453 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 |||||| || | |||| || || ||||| | || || | || || ||| | || ||| Sbjct 1528452 CAGCAAAGATTGATCTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTCCAAGATTAC 1528393 Query 40867 AACATCCAGAA 40877 |||||||| || Sbjct 1528392 AACATCCAAAA 1528382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515216900834320