Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq111 188 1e-42 seq89 163 4e-35 seq211 129 9e-25 seq256 122 1e-22 seq336 114 2e-20 seq123 114 2e-20 seq222 91.5 2e-13 >seq111 Length=4850898 Score = 188 bits (208), Expect = 1e-42 Identities = 370/539 (69%), Gaps = 11/539 (2%) Strand=Plus/Minus Query 203126 GTTTTTATTGCCCAATTATTAGCACCATTTATATTATCGTAATTTTCATTATAATAACAA 203185 |||||| | ||||| | | || || | ||| ||||| |||||||||||||| |||||| Sbjct 3861365 GTTTTTTTAGCCCAGTCGTATGCTCCTTCTATGTTATCATAATTTTCATTATAGTAACAA 3861306 Query 203186 AAATTATCACATAGTTCTTTACGAATAATAGCTTCTTCACAAAAAACTTCTACCGATTTA 203245 || ||||||| |||||| | |||| ||||||||| ||||||||| |||| || |||| Sbjct 3861305 AAGTTATCACTAAGTTCTCTGCGAACAATAGCTTCCTCACAAAAAGCTTCAACAGATT-- 3861248 Query 203246 GGATATAATTT--TTTATATTTGTTAATTTCTAATATTATTCTTTGAGTTGAAATTTGAC 203303 | || ||| ||| || | |||||| || |||||||| |||||||| | Sbjct 3861247 CTTTGTACTTTGATTTTAGCTTCACAGCTTCTAAAATACTTCTTTGAACAGAAATTTGTC 3861188 Query 203304 CAAAATGTATCCATGGTGATAAATTACTTATTGCATTAGCATTTGGATCATTTCtttttt 203363 ||||||| | |||||| ||||||||||| | |||| ||| |||||||||| | ||| Sbjct 3861187 CAAAATGAAACCATGGGGATAAATTACTAAGAGCATCAGCTGTTGGATCATTGCGTTTGC 3861128 Query 203364 tagcataatcttttaatctattttgtataaatatatctaatattttaaatgcatattttG 203423 | ||| ||||| | ||| | ||| || | || | |||| | || Sbjct 3861127 TGTGATATAACTTTAA-CCGTTTGTTCAAAAAATTTTCAAGCTCAGCCATGCCACCTCTG 3861069 Query 203424 T-ACCAGATTTTGCCCAAGAAACAGGTTTAACATTTCTATCAATATTTA-ATGATTGTTC 203481 | || | ||| ||||| ||||| | ||| |||||||||| | |||| | Sbjct 3861068 TGCCCTGCTTTAGCCCATGAAACTTTATCAACTGATCTATCAATAAGGACATGA-TCCAA 3861010 Query 203482 TGCttttttcca---attattatttattttaatatatgtattataagtatgtttaataat 203538 |||| | | ||| ||| |||| | ||| || || |||| | ||| | || | Sbjct 3861009 TGCTGTGTCCCACTCATTTTTATCAAGTTTTTGATCAGTGGTATATGGATGCCTTATCAC 3860950 Query 203539 aggtataaattCAGTTAAATATTCTGATAATTTATAATTTATTTTATTTCTAATGGTTTT 203598 |||| |||||| ||||| |||||| || |||| | |||||||||||||| || || Sbjct 3860949 AGGTGGAAATTCTGTTAAGAATTCTGGTAGTTTAGAGTTTATTTTATTTCTTATTGTGCG 3860890 Query 203599 TGCAGAATATTCTAATTTATTACTAGCAATCCAACATGGTACAATATTATGTGAATCAA 203657 |||| ||| || ||||||| | | ||| || || ||||| ||||| ||||||| Sbjct 3860889 AGCAGCATACTCCAATTTATCCGATGTCACCCAGCAAGGAACAATGTTATGAGAATCAA 3860831 Score = 123 bits (136), Expect = 4e-23 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 202868 CCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCATTTAAATNNNNNNNN 202927 |||||||| ||||| ||||| | |||||| ||| ||||||||||| |||| Sbjct 3861697 CCAACATAACCATTGGGATCTCTTCCATCCATACTGTATTTATCATTCAAATAAATTGAC 3861638 Query 202928 NNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATT 202987 | |||||||| |||| ||| |||||||||| |||||||| ||||| ||||| Sbjct 3861637 CACTCGAGTGCTTCTTGAGGTGTTTTGGTCCATTCTAGAATTTTTTTGGCCCAGTACATA 3861578 Query 202988 CTTAAATATCCATGCATTTTACCATAGATAATCATTTGTTTTTGTGATGCATTCCATAAA 203047 | |||| | ||||| |||||||| | | | || |||| ||| || |||||||| | | Sbjct 3861577 CGTAAAAAGCCATGAATTTTACCTTCTTTTACCAATTGTATTTCTGCAGCATTCCACAGA 3861518 Query 203048 TTGTCATGAGTTAA 203061 | ||||| ||||| Sbjct 3861517 TCATCATGTGTTAA 3861504 >seq89 Length=3244750 Score = 163 bits (180), Expect = 4e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || ||||| ||||| || | ||| ||||||| | Sbjct 1690980 ATGCAGATTTTTGTCAAGACTCTGACTGGCAAGACTATCACATTGGAGGTTGAAGCTTCT 1690921 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| || |||||||||||||| || || ||||| || ||| Sbjct 1690920 GACACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAGGGAATCCCACCAGACCAA 1690861 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || ||||| || |||||| | |||||| |||| || || || || ||| Sbjct 1690860 CAGCGTCTCATCTTTGCTGGCAAACAACTTGAGGATGGTCGCACTCTATCTGACTACAAT 1690801 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| ||||| |||||||||||||| || |||||| | ||||||||||| Sbjct 1690800 ATTCAGAAAGAGTCAACTTTGCATTTAGTATTACGTCTGCGAGGTGGTAT 1690751 Score = 159 bits (176), Expect = 5e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | ||||| || || || |||||||||||| | || | |||||| Sbjct 1691209 AATGCAAATTTTTGTCAAGACCCTCACTGGAAAAACTATAACTCTTGAAGTCGAAGCATC 1691150 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| |||||| ||| | ||| |||||||| || |||||||| || || || || || Sbjct 1691149 TGACACAATTGAAAATGTGAAAGCTAAAATTCAGGACAAAGAAGGCATCCCTCCAGACCA 1691090 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || | | |||||||| || |||||||| || ||| |||| ||||| ||||||||| Sbjct 1691089 GCAGCGTTTAATTTTTGCTGGTAAACAATTGGAAGATGGTCGCACATTGTCAGATTATAA 1691030 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || |||||||| |||||| | || |||||| | ||| | || ||||| || Sbjct 1691029 CATCCAAAAAGAGTCAACTCTTCACTTGGTTCTGCGTCTTCGTGGTGGCAT 1690979 Score = 118 bits (130), Expect = 2e-21 Identities = 185/261 (71%), Gaps = 4/261 (2%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || || ||||| ||||| || || | ||| | ||||| Sbjct 1691664 ATGCAAATTTTTGTCAAAACTCTGACAGGTAAAACCATCACACTTGAGGTCGAAGCCTCC 1691605 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| || | || ||||||||||| |||||||| || || || |||||| Sbjct 1691604 GACACAATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGAATTCCCCCAGATCAA 1691545 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || ||||| || |||||||| | || || |||| || || ||| || ||| Sbjct 1691544 CAGCGTCTCATTTTCGCCGGAAAACAGCTTGAAGACGGTCGCACTTTGTCAGACTACAAT 1691485 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAA--ATT 124776 |||||||| || || || ||||||| || || ||| | |||| || || ||| || Sbjct 1691484 ATTCAAAAGGAGTCGACACTGCATTTAGTATTGCGTCTTAGAGGAGGCATGCAAATCTTT 1691425 Query 124777 CATAAAA-ATTGA-TTGTAAA 124795 ||||| ||||| | ||||| Sbjct 1691424 GTTAAAACATTGACTGGTAAA 1691404 Score = 114 bits (126), Expect = 2e-20 Identities = 168/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || ||||| || || || | ||| |||| | Sbjct 1691892 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATTACCCTTGAGGTTGAGTCTTCA 1691833 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | || |||||||||||||| || || || ||||| ||||| Sbjct 1691832 GATACTATTGAGAATGTTAAGGCCAAAATTCAAGATAAGGAGGGAATTCCACCAGATCAG 1691773 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || | || ||||| ||||||||||| || ||| | || || | |||||| || Sbjct 1691772 CAGAGATTGATCTTTGCTGGAAAACAATTGGAAGATGGACGCACTCTGTCAGATTACAAC 1691713 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||| |||||||| || ||||| | || | | || |||| ||||| ||| || Sbjct 1691712 ATTCAGAAAGAATCCACACTGCATCTTGTACTCAGATTGAGAGGAGGTATGCAAATTT 1691655 Score = 109 bits (120), Expect = 8e-19 Identities = 167/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || ||| | || || ||||| || ||| | || | || || Sbjct 1691436 ATGCAAATCTTTGTTAAAACATTGACTGGTAAAACCATTACTTTGGAAGTCGAGGCCTCA 1691377 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| ||| | || || || ||||| |||||||| || ||||| ||||| Sbjct 1691376 GACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAG 1691317 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | |||||||| || || || || || ||| |||| ||||| || |||||| Sbjct 1691316 CAGCGTTTAATTTTTGCTGGTAAGCAGTTGGAAGATGGTCGCACATTGTCGGACTATAAT 1691257 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||| || || | || ||||| | ||| | || ||||| || ||| || Sbjct 1691256 ATTCAAAAAGAGTCCACCCTCCACTTGGTACTCCGTCTGCGTGGTGGAATGCAAATTT 1691199 Score = 87.8 bits (96), Expect = 3e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | ||||| || || || ||||| || || | ||| | || ||| Sbjct 1692121 AATGCAGATCTTTGTGAAGACGCTGACTGGTAAAACCATCACATTGGAGGTCGAGGCATC 1692062 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 || || ||| ||| |||| || || |||||||| ||||| || || || || || | Sbjct 1692061 CGACACCATTGAAAATGTTAAGGCA-AAGATTCAAGACAAAGAGGGCATCCCCCCAGACC 1692003 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || || | || ||||||||||| || | || ||| | || || || ||||||| Sbjct 1692002 AGCAGAGATTGATCTTTGCAGGAAAGCAGCTCGAAGATGGACGCACCTTGTCTGATTATA 1691943 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 | ||||| || ||||| || | || | || | | || |||||||||| Sbjct 1691942 ACATTCAGAAGGAATCCACACTCCACCTTGTACTCAGATTGAGAGGTGGTAT 1691891 >seq211 Length=1509898 Score = 129 bits (142), Expect = 9e-25 Identities = 186/262 (71%), Gaps = 3/262 (1%) Strand=Plus/Minus Query 205435 TTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAAT 205494 ||||| || || | ||| || |||||||| |||||||| ||| ||| | ||||||| Sbjct 53294 TTTAATTTTGTAATATGAGCTATCATATATGTCAATAAGGAATATGAAGCTATATTAAAT 53235 Query 205495 GGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATTA 205554 |||||||| | ||||| ||||| ||||||||| | |||||| | ||| | | |||| Sbjct 53234 GGTACACCAAGTCCCATGTCAGCACTTCTTTGATAAAGTTGACAAGAAAGTTCTCCATTA 53175 Query 205555 TTAATTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCT 205614 | || | ||| || || || |||||||||||| | | |||| || || || Sbjct 53174 GCA---ACGTAAAACTGAACCAATGCATGACAAGGTGGGAGAGCCATTATTGGAATGTCA 53118 Query 205615 ATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttattt 205674 || |||||||| |||| | || || ||||| || ||||||||| ||| ||| Sbjct 53117 ATTGGATTCCAAGCTGACATAATGATTCTTCTATCATCTGGTTTATTTAGAATTGTATCA 53058 Query 205675 atAATATGTGTTAATTGATCAA 205696 || | ||| |||||||||||| Sbjct 53057 ATTACTTGTTTTAATTGATCAA 53036 >seq256 Length=3517054 Score = 122 bits (134), Expect = 1e-22 Identities = 169/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || ||||| ||||| ||||| || || | ||| |||| || Sbjct 131012 AATGCAAATCTTTGTGAAAACACTCACAGGAAAAACCATCACCCTTGAGGTTGATGCGGC 130953 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| | ||| ||| | || ||||| |||||||| ||||| || || || || || Sbjct 130952 TGACAGCATTGAAAATGTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCCAGACCA 130893 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||| | || || || ||||||||||| || ||| | || ||||| ||||| || Sbjct 130892 GCAAAGATTGATCTTCGCCGGAAAACAATTGGAAGATGGACGTACATTGTCCGATTACAA 130833 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 |||||| || ||||| || | ||||| || | ||| | || |||||| ||||| Sbjct 130832 TATTCAGAAGGAATCTACCCTTCATTTAGTCCTTCGTCTGCGTGGTGGTGCCAAAAA 130776 >seq336 Length=3726090 Score = 114 bits (126), Expect = 2e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | || || | || || |||||||| || | ||| | ||||| Sbjct 1528570 AATGCAGATCTTTGTCAAAACTTTGACTGGTAAAACTATTACCTTGGAGGTCGAAGCCTC 1528511 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | || ||||| |||||||| ||||| || || || ||||| Sbjct 1528510 TGATACTATTGAAAATGTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCCGGATCA 1528451 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||| | || ||||| |||||||||||||| ||| |||| || | ||||||| || Sbjct 1528450 GCAAAGATTGATCTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTCCAAGATTACAA 1528391 Query 124718 TATTCAAAAAG 124728 || ||||||| Sbjct 1528390 CATCCAAAAAG 1528380 >seq123 Length=3260300 Score = 114 bits (126), Expect = 2e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | || || |||| ||||| || || ||| | || ||||||| Sbjct 712315 AATGCAGATCTTTGTCAAAACTTTAACTGGCAAGACCATTACTTTGGAAGTTGAAGCTTC 712256 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | ||| ||||| ||||| ||||| || || || || ||||| Sbjct 712255 TGATACTATTGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGAATTCCTCCAGATCA 712196 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | || || || || |||||||| || ||| |||| || | |||||||||| Sbjct 712195 GCAGAGGTTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGCACTCTTCAAGATTATAA 712136 Query 124718 TATTCAAAAAG 124728 ||| ||||||| Sbjct 712135 TATACAAAAAG 712125 >seq222 Length=7060343 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || | || || || || || || | ||| |||| || | Sbjct 1554048 ATGCAGATTTTTGTTAAAACTTTGACTGGTAAGACCATCACCTTGGAGGTTGAGGCCTCT 1553989 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || ||||| || ||||||||||| || || || ||||| Sbjct 1553988 GACACTATTGAAAATGTCAAGGCTAAAATCCAGGATAAAGAAGGAATCCCTCCAGATCAG 1553929 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | || ||||| || |||||||| || ||| |||| || | ||||||| ||| Sbjct 1553928 CAAAGATTGATCTTTGCCGGTAAACAATTGGAAGATGGTCGTACCCTTCAAGATTACAAT 1553869 Query 124719 ATTCAAAAAG 124728 || || |||| Sbjct 1553868 ATCCAGAAAG 1553859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755452628777600