Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq336 113 7e-20 seq89 113 7e-20 seq256 98.7 1e-15 seq123 98.7 1e-15 seq222 95.1 2e-14 seq1 93.3 6e-14 >seq336 Length=3726090 Score = 113 bits (124), Expect = 7e-20 Identities = 80/92 (87%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 || || |||||| ||||| | | ||| |||||||||||||||||||| ||||||||| Sbjct 1528388 ATGTTGTAATCTTGGAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGATCAATCTT 1528447 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 ||||||||||||||||||||||| |||||||| Sbjct 1528448 TGCTGATCCGGAGGAATTCCTTCCTTATCTTG 1528479 >seq89 Length=3244750 Score = 113 bits (124), Expect = 7e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| | ||| | ||| | ||| | || |||||||| || || |||||||| Sbjct 1691666 CCTCCTCTCAATCTGAGTACAAGATGCAGTGTGGATTCTTTCTGAATGTTGTAATCTGAC 1691725 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| || ||||||||||||||||| |||||||| |||||||| || ||| Sbjct 1691726 AGAGTGCGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGTGGA 1691785 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||| || |||||||| Sbjct 1691786 ATTCCCTCCTTATCTTG 1691802 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||| || | |||||| ||||| ||||| || ||||| ||||| || || || Sbjct 1690754 CCACCTCGCAGACGTAATACTAAATGCAAAGTTGACTCTTTCTGAATATTGTAGTCAGAT 1690813 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| || | |||||| |||||||| || | | || || || || || Sbjct 1690814 AGAGTGCGACCATCCTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGTGGG 1690873 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||| ||||||||||| Sbjct 1690874 ATTCCCTCTTTATCTTG 1690890 >seq256 Length=3517054 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 || ||||| | |||||||| || ||||| ||||| || | || | | ||| || Sbjct 130803 ACTAAATGAAGGGTAGATTCCTTCTGAATATTGTAATCGGACAATGTACGTCCATCTTCC 130862 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 ||||||||||| || || |||||||||||||| || |||||||||||||| |||||||| Sbjct 130863 AATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTATCTTG 130921 >seq123 Length=3260300 Score = 98.7 bits (108), Expect = 1e-15 Identities = 135/197 (69%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 146095 TATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCT 146154 ||||||||||||| |||||| | | ||| || |||||||| ||||| || ||||| || Sbjct 712132 TATATTATAATCTTGAAGAGTGCGACCATCTTCCAATTGTTTACCAGCGAAGATCAACCT 712191 Query 146155 TTGCTGATCCGGAGGAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGT 146214 |||||||| ||||||||||| ||||| ||||| ||| Sbjct 712192 CTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATTTTAGCTTTGACATTTTCAATAGT 712251 Query 146215 ATCTGAACTTTCTACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTG 146274 ||| ||| ||| ||||| | || || || || || ||||| ||||| | || || || Sbjct 712252 ATCAGAAGCTTCAACTTCCAAAGTAATGGTCTTGCCAGTTAAAGTTTTGACAAAGATCTG 712311 Query 146275 CATTTTATTAGAAAAAT 146291 |||||| || || ||| Sbjct 712312 CATTTTGCTAAAATAAT 712328 >seq222 Length=7060343 Score = 95.1 bits (104), Expect = 2e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 ||||| |||||| ||| || | | ||| || |||||||| || ||||| ||||||||| Sbjct 1553867 ATATTGTAATCTTGAAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAGATCAATCTT 1553926 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 |||||||| ||||| |||||||||||||| || Sbjct 1553927 TGCTGATCTGGAGGGATTCCTTCTTTATCCTG 1553958 >seq1 Length=8792355 Score = 93.3 bits (102), Expect = 6e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 146081 GTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCA 146140 || |||||||| || ||||| |||||||| || | | ||| || | |||||||||| Sbjct 1064671 GTTGATTCTTTCTGAATGTTATAGTCTGAAAGTGTGCGTCCATCTTCGAGTTGTTTTCCA 1064612 Query 146141 GCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCT 146176 ||||| || |||||||||||||| |||||||||||| Sbjct 1064611 GCAAAGATTAATCTTTGCTGATCTGGAGGAATTCCT 1064576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743523082013440