Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq89 95.1 8e-15 >seq89 Length=3244750 Score = 95.1 bits (104), Expect = 8e-15 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTC 34233 || || || ||||| | || ||| ||||| ||||| || || |||| | || || | Sbjct 1691906 CTGAGTACAAGGTGGAGTGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTG-CGTCC 1691964 Query 34234 GTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTT 34293 || || | |||||| ||||| || || | | ||||||||| ||| | || ||| || Sbjct 1691965 ATCTTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGGATGCCCTCTTT 1692024 Query 34294 GTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGAT 34353 ||| |||||| ||| | || | || | |||| | ||||| |||| ||||| Sbjct 1692025 GTCTTGAATCTTTGCCTTAACATTTTCAATGGTGTCGGATGCCTCGACCTCCAATGTGAT 1692084 Query 34354 GGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||| || || || || ||||||||||||||||| Sbjct 1692085 GGTTTTACCAGTCAGCGTCTTCACAAAGATCTGCAT 1692120 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||||| || | || || ||||| ||||| || || || Sbjct 1690526 CCACCACGCAGACGCAGCACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAATCTGAG 1690585 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGG 34280 || ||| | || ||||||||||| || || ||||| || ||||| ||||| || || Sbjct 1690586 AGTGTACGTCCATCCTCCAACTGCTTACCAGCAAAAATTAGACGCTGTTGGTCTGGAGGG 1690645 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCG 34339 || || |||||||| || ||| ||||| | || | || | ||| | | ||| Sbjct 1690646 ATAC-CT-TCCTTGTCCTGGAT-TTTGGCTTTCACATTCTCAATGGTATCAGAAGCTTCA 1690702 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || |||| |||||||| || || || ||||| || ||||| |||||||| Sbjct 1690703 ACCTCCAAAGTGATGGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 1690752 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||| |||| ||| | ||| || ||||| ||||||||||| ||| Sbjct 1689820 CCACCACGCAGACGCAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGAC 1689879 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || |||| ||| || || || || || || |||||||| || || Sbjct 1689880 AGTGTGCGTCCATCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGA 1689939 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || || ||||| ||||| ||| | || | || | |||| | ||| || Sbjct 1689940 ATGCCTTCTTTGTCTTGAATCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCACT 1689999 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| || || || | || || |||||||||||||| Sbjct 1690000 TCCAAGGTGATGGTCTTTCCTGTCAATGTCTTGACAAAGATCTGCAT 1690046 Score = 82.4 bits (90), Expect = 5e-11 Identities = 136/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 ||||| || || |||||||| || || ||| | || || | |||||||| || ||| Sbjct 1689628 TCTTTTTGGATATTGTAGTCTGATAGAGTACGACCATCCTCAAGTTGCTTGCCAGCAAAA 1689687 Query 34259 ATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGAT 34316 || | ||||||||||| || || || || |||||||| ||||| |||| || Sbjct 1689688 ATCAAACGCTGCTGGTCTGGAGGGATAC-CT-TCCTTGTCCTGGATCTTGGCTTTTACAT 1689745 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | || | ||| | | ||| || |||| |||||||| || || || ||||| || | Sbjct 1689746 TCTCAATGGTATCAGAAGCTTCAACCTCCAATGTGATGGTCTTACCAGTAAGAGTCTTAA 1689805 Query 34377 CAAAGATCTGCAT 34389 |||| |||||||| Sbjct 1689806 CAAAAATCTGCAT 1689818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323070594333920