Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq34 165 8e-36 >seq34 Length=2688268 Score = 165 bits (182), Expect = 8e-36 Identities = 347/510 (68%), Gaps = 8/510 (2%) Strand=Plus/Plus Query 16286 AATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCA 16345 || ||||| |||||||||| ||||| || || | ||||||||| || ||||| |||| Sbjct 1149215 AAAGTAAGTCCTGGCATTAAACCTCGCTTCTTCAACCAAAATATGGCAGCAAAACTACCA 1149274 Query 16346 GAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAttt 16405 ||||| || |||||||| || ||||| || | | ||||||| | | || | | Sbjct 1149275 CTGAAGAAAATTCCTTCAACAGCTGCAAAAGCTATAACTCGCTCAGCAAATGTAGCACTC 1149334 Query 16406 ttactttct-atccattttttagcccaatttgctttttgtttAACACA-GTTCATGTTCT 16463 ||| | || ||||| || ||||||| || ||||| | ||||||| | | ||| | Sbjct 1149335 TTA-TGACTGATCCAGTTCATAGCCCAGTTAGCTTTCTTGGTAACACAAGGTAGAGTT-T 1149392 Query 16464 CTATTGCATTAAATAAATAAtttttttCTTTGCT--ATCTAAAATATAAGTATCTATTAG 16521 | |||||||| || || || | | || | | ||| ||| || ||||| || || Sbjct 1149393 CAATTGCATTGAACAAGTAGTCCCT--CTGAGATGGATCAGTAATGTAGGTATCAATAAG 1149450 Query 16522 TAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCT 16581 | |||||||||||| || | ||| ||||| |||| || || ||||| ||||| | Sbjct 1149451 AAGTGAATACATTTCTGAGTGCACATTTTCCATGGCTACTTGGAAGCCATAGAAGCAGCG 1149510 Query 16582 AGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCC 16641 ||| || | | ||| ||||| | || | || | | ||||| || || || || Sbjct 1149511 AGCCTCAGTGACTTGAACTTCCTGGCTGAATCGCTCAACGAGATTTTCATTGACAATGCC 1149570 Query 16642 ATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTGAAAG 16701 ||| || ||||| || || | || || |||||||| ||| ||||| || | Sbjct 1149571 ATCAGAGGCAGCAAAGAATGCTAATACATGAGAAATAAAATGTTTCTCGTTGTCATTCAA 1149630 Query 16702 TTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGC 16761 ||| ||| || | ||| |||||||| || || ||||| || |||||||| ||||| Sbjct 1149631 CTTTGCCCAATCGTGCATATCCTTTGATAAGTCTACTTCTTCGACCGTCCAAAATGAAGC 1149690 Query 16762 AACAGCCTTTTTATACATTTTCCATATGTC 16791 |||| || || ||||| | ||| || || Sbjct 1149691 CTCAGCTTTCTTGTACATGTGCCAAATATC 1149720 Score = 95.1 bits (104), Expect = 1e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| ||||| | |||| ||||||||||||||||||| |||||||| |||||||| | | Sbjct 1148720 TTTTGGTATTCTCCAACTTTCTTTTCAAAGAAATTTGTCTTTCCTTCCAATGAAATTTGT 1148779 Query 16004 TCCATAAAATCAAAAGGATT 16023 ||||| || || |||||||| Sbjct 1148780 TCCATGAAGTCGAAAGGATT 1148799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462509936040200