Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq211 114 1e-20 >seq211 Length=1509898 Score = 114 bits (126), Expect = 1e-20 Identities = 182/259 (70%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 20308 GATCAATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATT 20367 ||||||||| || | || ||| || |||| || || ||| | || |||||||| ||| Sbjct 53038 GATCAATTAAAACAAGTAATTGATACAATTCTAAATAAACCAGATGATAGAAGAATCATT 53097 Query 20368 TTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTA 20427 | | || ||||| | | || | || |||||||| | || || |||||| || Sbjct 53098 ATGTCAGCTTGGAATCCAATTGACATTCCAATAATGGCTCTCCCACCTTGTCAT--GCAT 53155 Query 20428 TGC--CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTG 20485 || || ||||||||||||||| ||| | || |||||| | |||||| || |||| Sbjct 53156 TGGTTCAGTTTTACGTTGCTAATGGAGAACTTTCTTGTCAACTTTATCAAAGAAGTGCTG 53215 Query 20486 ATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTG 20545 | |||||||| ||||| || || ||||| || ||| | | | || |||||||| | Sbjct 53216 ACATGGGACTTGGTGTACCATTTAATATAGCTTCATATTCCTTATTGACATATATGATAG 53275 Query 20546 CACATGTTACAGATTTAAA 20564 | ||| ||||| | ||||| Sbjct 53276 CTCATATTACAAAATTAAA 53294 Score = 96.9 bits (106), Expect = 3e-15 Identities = 178/261 (68%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 20043 ATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATG 20102 |||||| | ||||| || || | ||||||||| || || || ||||| || | || Sbjct 52687 ATTTCCTCTTTTAACGACAAAGAGAGTATTTTGGCGCGGAGTGGTCGAAGAACTACTTTG 52746 Query 20103 GTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAG 20162 ||||||||| || ||||| ||| | | || | || |||| || | || ||| Sbjct 52747 GTTTATTAAGGGTTCAACGAATGCCAAAGAATTATCTGATAAAGATATTCACATATGGGA 52806 Query 20163 CGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGAGGGGGA 20222 || || | || |||||||| | | ||| ||| | | ||| || || Sbjct 52807 TGCTAATAGCTCGCGAGAATTTTTAGATTCCTGTGGTTTTACGGATAGAGAAGTTGGCGA 52866 Query 20223 TTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAA 20282 ||| || || || ||||||||||| ||||| ||||||||||| ||||||| ||||| | Sbjct 52867 TTTAGGACCGGTTTATGGATTTCAGTGGAGGCATTTTGGAGCAAAATATGTCAACATGCA 52926 Query 20283 CACAAATTATTTTGGACAAGG 20303 ||| ||||| ||||||||| Sbjct 52927 TACAGATTATACTGGACAAGG 52947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399182263175365