Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq89 131 1e-25 seq256 100 2e-16 >seq89 Length=3244750 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || ||||||||||| | ||| | ||||| ||| || |||||||||||||| || | Sbjct 1691666 CCTCCTCTCAATCTGAGTACAAGATGCAGTGTGGATTCTTTCTGAATGTTGTAATCTGAC 1691725 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || |||| ||||||||| || || ||||| | ||| || || || || Sbjct 1691726 AGAGTGCGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGTGGA 1691785 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | |||||||| || |||||| |||||| | | | | || | ||| ||| Sbjct 1691786 ATTCCCTCCTTATCTTGAATTTTGGCCTTAACATTCTCAATAGTATCTGAAGACTCAACC 1691845 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | |||||| |||||||| ||||||||||| |||||||||||||| Sbjct 1691846 TCAAGGGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 1691892 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| | ||| | ||| || ||| |||||||||||||| || || | Sbjct 1691894 CCACCTCTCAATCTGAGTACAAGGTGGAGTGTGGATTCCTTCTGAATGTTATAATCAGAC 1691953 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 | ||| | || || || || ||||| || || ||||| | ||| ||||| || || Sbjct 1691954 AAGGTGCGTCCATCTTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGG 1692013 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||| ||||| ||| ||| |||||| | | | |||| |||| ||| Sbjct 1692014 ATGCCCTCTTTGTCTTGAATCTTTGCCTTAACATTTTCAATGGTGTCGGATGCCTCGACC 1692073 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 |||| || || || || || ||||| |||||||||||||| ||||| || Sbjct 1692074 TCCAATGTGATGGTTTTACCAGTCAGCGTCTTCACAAAGATCTGCATTTT 1692123 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| ||||||||||| |||| ||| | || ||| Sbjct 1689838 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGACAGTGTGCGTCCATCTTCC 1689897 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || || || || | ||||| || || ||||| | || || ||||| | Sbjct 1689898 AGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCTTGA 1689957 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | |||| | | ||||| |||| ||| || ||||| Sbjct 1689958 ATCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCACTTCCAAGGTGATGGTCTTT 1690017 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||||| |||||||| ||||| Sbjct 1690018 CCTGTCAATGTCTTGACAAAGATCTGCAT 1690046 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 ||| ||||| | | ||||| || ||||| || |||||| ||||| |||||||| Sbjct 1691437 GCCTCCTCTAAGACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGA 1691496 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || |||| |||| || || |||||||||||||| || | |||||||| || || || Sbjct 1691497 CAAAGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGG 1691556 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | || || ||||| |||||| ||| || | | |||| | || || Sbjct 1691557 AATTCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGAC 1691616 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| | || || || || || |||||||| || ||||| |||||||| Sbjct 1691617 CTCAAGTGTGATGGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || || ||||||||||||||| || || ||| || | || ||| Sbjct 1690544 ACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAATCTGAGAGTGTACGTCCATCCTCC 1690603 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || || || || || || | ||||||||||| ||||| | ||| ||||||||| Sbjct 1690604 AACTGCTTACCAGCAAAAATTAGACGCTGTTGGTCTGGAGGGATACCTTCCTTGTCCTGG 1690663 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| || || | | | | | || | | || ||||||| || || ||||| Sbjct 1690664 ATTTTGGCTTTCACATTCTCAATGGTATCAGAAGCTTCAACCTCCAAAGTGATGGTCTTA 1690723 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || |||||||| ||||| || ||||| Sbjct 1690724 CCAGTAAGAGTCTTTACAAAAATCTGCAT 1690752 >seq256 Length=3517054 Score = 100 bits (110), Expect = 2e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||||||||| ||||| ||| || | || | || |||| ||||||||||||||| Sbjct 130821 TCCTTCTGAATATTGTAATCGGACAATGTACGTCCATCTTCCAATTGTTTTCCGGCGAAG 130880 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 ||||| | || ||||| ||||| | || ||||| || ||||| ||| || Sbjct 130881 ATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTT 130940 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | |||||| | | || ||||| | ||| || || || || || || || |||||| Sbjct 130941 TCAATGCTGTCAGCCGCATCAACCTCAAGGGTGATGGTTTTTCCTGTGAGTGTTTTCACA 131000 Query 45326 AAGATTTGCATGTTG 45340 ||||||||||| ||| Sbjct 131001 AAGATTTGCATTTTG 131015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395073481052497