Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq256 114 1e-20 seq89 98.7 8e-16 seq336 96.9 3e-15 seq222 95.1 9e-15 >seq256 Length=3517054 Score = 114 bits (126), Expect = 1e-20 Identities = 170/240 (71%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 18089 TTTTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTT 18148 |||||| | || || || || | ||| || | ||||| || ||||| || ||||| || Sbjct 130776 TTTTTGGCA-CCACCACGCAGACGAAGGACTAAATGAAGGGTAGATTCCTTCTGAATATT 130834 Query 18149 GTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTG 18208 ||| |||| || ||| | ||||||||||||||| || || |||| | |||||| || Sbjct 130835 GTAATCGGACAATGTACGTCCATCTTCCAATTGTTTTCCGGCGAAGATCAATCTTTGCTG 130894 Query 18209 ATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACC 18268 || || | ||||||||||| |||| |||||| | | ||| ||||| | Sbjct 130895 GTCTGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTTCAATGCTGTCAGC 130954 Query 18269 GGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 | || |||| ||||||| |||| || || | |||||| ||||| ||||||||||| Sbjct 130955 CGCATCAACCTCAAGGGTGATGGTTTTTCCTGTGAGTGTTTTCACAAAGATTTGCATTTT 131014 >seq89 Length=3244750 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | | ||| ||||| | || ||||| |||||||| ||||||||||| || | | Sbjct 1691666 CCTCCTCTCAATCTGAGTACAAGATGCAGTGTGGATTCTTTCTGAATGTTGTAATCTGAC 1691725 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||||||||||||||| || ||| |||| | ||| || ||||| || Sbjct 1691726 AGAGTGCGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGTGGA 1691785 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | || |||||||| ||||| ||| || | ||| ||| || | ||| Sbjct 1691786 ATTCCCTCCTTATCTTGAATTTTGGCCTTAACATTCTCAATAGTATCTGAAGACTCAACC 1691845 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||| ||| | ||||| |||| || || ||||| |||||||| Sbjct 1691846 TCAAGGGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 1691892 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || | ||||||| ||| || || || ||||||||||| || ||||| | Sbjct 1691209 TCCACCACGCAGACGGAGTACCAAGTGGAGGGTGGACTCTTTTTGAATATTATAGTCCGA 1691268 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || ||| || ||||||||| || || || ||| | || | | || ||||| || Sbjct 1691269 CAATGTGCGACCATCTTCCAACTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGTGG 1691328 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| || || || | |||||| | | ||| ||||| || |||| Sbjct 1691329 GATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCTGAGGCCTCGAC 1691388 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | || ||| |||| || ||||||||||| ||||| |||||||| Sbjct 1691389 TTCCAAAGTAATGGTTTTACCAGTCAATGTTTTAACAAAGATTTGCAT 1691436 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| |||||| || || || || || ||||||||||| | || ||| | |||| Sbjct 1689835 AGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGACAGTGTGCGTCCATCT 1689894 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| ||||| || ||| ||||||| | || ||||| || | |||||| || || Sbjct 1689895 TCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCT 1689954 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 ||| | |||||| | | ||| |||||| | || ||| | ||||||| | Sbjct 1689955 TGAATCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCACTTCCAAGGTGATGGTC 1690014 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || |||||||| || ||||| || ||||| Sbjct 1690015 TTTCCTGTCAATGTCTTGACAAAGATCTGCAT 1690046 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| |||||| ||||| |||||||| ||||| || || | || ||| || |||| Sbjct 1690997 AGAACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATCTGACAATGTGCGACCATCT 1691056 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 ||||||||||| || ||| | || | | || || || || | |||||| || || Sbjct 1691057 TCCAATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGGGATGCCTTCTTTGTCC 1691116 Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 ||||| | || || || | | ||| |||||| | ||| ||||| || || | Sbjct 1691117 TGAATTT-TAGCTTTCACATTTTCAATTGTGTCAGATGCTTCGACTTCAAGAGTTATAGT 1691175 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| || || | || || ||||||||||||||| Sbjct 1691176 TTTTCCAGTGAGGGTCTTGACAAAAATTTGCATT 1691209 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 || ||||| || || |||||||| |||||||| | || || || ||||| | ||| Sbjct 1691462 TGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGACAAAGTGCGACCGTCTTCAAGCTGT 1691521 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 || || || | || || | |||||||| ||| | ||||| || || ||||| Sbjct 1691522 TTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGAATTCCTTCTTTGTCTTGAATTTTG 1691581 Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302 ||| || | | ||| ||||| || ||| |||| |||||| |||| || ||| Sbjct 1691582 GCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGACCTCAAGTGTGATGGTTTTACCTGTC 1691641 Query 18303 AATGTTTTTACAAAAATTTGCAT 18325 | ||||| |||||||||||||| Sbjct 1691642 AGAGTTTTGACAAAAATTTGCAT 1691664 >seq336 Length=3726090 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 18136 CTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGA 18195 ||||||| |||||||| || | || || |||||| |||||||| || ||| ||| Sbjct 1528380 CTTTTTGGATGTTGTAATCTTGGAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGA 1528439 Query 18196 TAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTG 18255 | | |||||| |||||| || | ||||||||||| |||| |||||| | | Sbjct 1528440 TCAATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTT 1528499 Query 18256 CAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAA 18315 ||| ||| ||| || ||| || | ||| || |||| || ||||| ||||| |||| Sbjct 1528500 CAATAGTATCAGAGGCTTCGACCTCCAAGGTAATAGTTTTACCAGTCAAAGTTTTGACAA 1528559 Query 18316 AAATTTGCATTTT 18328 | || |||||||| Sbjct 1528560 AGATCTGCATTTT 1528572 >seq222 Length=7060343 Score = 95.1 bits (104), Expect = 9e-15 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 18167 ACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTC 18226 || ||||||||||||||| || ||| |||| | |||||| ||||| || | ||||| Sbjct 1553890 ACCATCTTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGATCTGGAGGGATTCCTTC 1553949 Query 18227 CTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGT 18286 ||||| |||| |||||| | | ||| ||||||| || ||| || | ||| Sbjct 1553950 TTTATCCTGGATTTTAGCCTTGACATTTTCAATAGTGTCAGAGGCCTCAACCTCCAAGGT 1554009 Query 18287 GATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 |||| | || || ||||| ||||| |||||||| ||||| || Sbjct 1554010 GATGGTCTTACCAGTCAAAGTTTTAACAAAAATCTGCATATT 1554051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379342349497965