Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq34 233 2e-56 seq89 125 6e-24 seq56 100 3e-16 >seq34 Length=2688268 Score = 233 bits (258), Expect = 2e-56 Identities = 395/568 (70%), Gaps = 12/568 (2%) Strand=Plus/Minus Query 57540 TTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCA 57599 || || || ||||| ||| ||| || || |||||| |||||||||| || || || || Sbjct 1149747 TTCGTGATCTTTCCCATTCAATGGCCTGATATTTGGCACATGTACAAGAAAGCTGAGGCT 1149688 Query 57600 TCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTC 57659 || |||||||| ||||||||||||||| | || |||||| || |||||||| | Sbjct 1149687 TCATTTTGGACGGTCGAAGAAGTAGACTTATCAAAGGATATGCACGATTGGGCAAAGTTG 1149628 Query 57660 AAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGT 57719 || || |||| | |||||||| || || || || || || || || || ||||| Sbjct 1149627 AATGACAACGAGAAACATTTTATTTCTCATGTATTAGCATTCTTTGCTGCCTCTGATGGC 1149568 Query 57720 ATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGA 57779 ||||| || || ||| | || || |||| || ||||| ||||| || ||||| | Sbjct 1149567 ATTGTCAATGAAAATCTCGTTGAGCGATTCAGCCAGGAAGTTCAAGTCACTGAGGCTCGC 1149508 Query 57780 TGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTC 57839 ||||| || || || ||||| ||||| ||||| ||||| |||||||||||||| || || Sbjct 1149507 TGCTTCTATGGCTTCCAAGTAGCCATGGAAAATGTGCACTCAGAAATGTATTCACTTCTT 1149448 Query 57840 ATCGATACGTACGTGAAGGA--CAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAA 57897 || ||||| ||| | | || || | ||| || || ||||||| || || |||| Sbjct 1149447 ATTGATACCTACATTACTGATCCATCTCAGAGGGAC-TA-CTTGTTCAATGCAATTGAAA 1149390 Query 57898 CAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGA----TAAAAAGCGCC 57953 | | || | ||||||| || | ||| | || || |||| | | ||| Sbjct 1149389 CTCTACCTTGTGTTACCAAGAAAGCTAACTGGGCTATGAACTGGATCAGTCATAAG---- 1149334 Query 57954 ACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCG 58013 | || || || || ||| | | || || || || || || ||||| || ||||| Sbjct 1149333 AGTGCTACATTTGCTGAGCGAGTTATAGCTTTTGCAGCTGTTGAAGGAATTTTCTTCAGT 1149274 Query 58014 GGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTT 58073 || || ||||| || ||||||||| ||||||| || || | ||||| || || || || Sbjct 1149273 GGTAGTTTTGCTGCCATATTTTGGTTGAAGAAGCGAGGTTTAATGCCAGGACTTACTTTC 1149214 Query 58074 AGCAACGAGTTGATATCGCGCGACGAGG 58101 ||||| || | || || ||||| |||| Sbjct 1149213 AGCAATGAACTAATTTCTCGCGATGAGG 1149186 >seq89 Length=3244750 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| || || || ||||| || || | || || ||| | || Sbjct 1691208 ATGCAAATTTTTGTCAAGACCCTCACTGGAAAAACTATAACTCTTGAAGTCGAAGCATCT 1691149 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || ||| | ||| |||||| |||||| | || || |||||| Sbjct 1691148 GACACAATTGAAAATGTGAAAGCTAAAATTCAGGACAAAGAAGGCATCCCTCCAGACCAG 1691089 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||| |||| || ||||| ||||| |||||||| | || || ||||||||| Sbjct 1691088 CAGCGTTTAATTTTTGCTGGTAAACAATTGGAAGATGGTCGCACATTGTCAGATTATAAC 1691029 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || |||||||| || |||||||| |||| || Sbjct 1691028 ATCCAAAAAGAGTCAACTCTTCACTTGGTTCT 1690997 Score = 113 bits (124), Expect = 4e-20 Identities = 166/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| ||||||||||| || || || || ||||| | || |||||| | || Sbjct 1690752 ATGCAGATTTTTGTAAAGACTCTTACTGGTAAGACCATCACTTTGGAGGTTGAAGCTTCT 1690693 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || ||| | ||| |||||||||||| | || || ||||| Sbjct 1690692 GATACCATTGAGAATGTGAAAGCCAAAATCCAGGACAAGGAAGGTATCCCTCCAGACCAA 1690633 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG---ACTATGAGCGATTAT 31369 ||||||||||| || ||||| || |||||||| || | | | ||| | | |||||| Sbjct 1690632 CAGCGTCTAATTTTTGCTGGTAAGCAGTTGGAGGA-TGGACGTACACTCTCA--GATTAT 1690576 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||| || || || || || ||| |||| || | ||| | || |||| Sbjct 1690575 AACATTCAGAAGGAGTCAACCCTCCATTTGGTGCTGCGTCTGCGTGGTGGTA 1690524 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||||| || || |||||| | || || ||| | ||| Sbjct 1690046 ATGCAGATCTTTGTCAAGACATTGACAGGAAAGACCATCACCTTGGAAGTGGAAGCTTCC 1689987 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| ||||| | || ||||| |||||| | || || || ||| Sbjct 1689986 GACACTATTGAAAATGTCAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCAGATCAG 1689927 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || || ||||| |||||| ||||||| | | | || || || || || Sbjct 1689926 CAGCGTCTTATCTTTGCTGGTAAACAGCTGGAAGA-TGGACGCACACTGTCTGACTACAA 1689868 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || ||||||||||| |||| || | ||| | || |||| Sbjct 1689867 CATCCAGAAGGAGTCGACTCTTCACTTGGTTCTGCGTCTGCGTGGTGGTA 1689818 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||||||||| ||||| || || ||| | || ||||| | || Sbjct 1691892 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATTACCCTTGAGGTTGAGTCTTCA 1691833 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | || || | ||| || ||||| || | || || || ||| Sbjct 1691832 GATACTATTGAGAATGTTAAGGCCAAAATTCAAGATAAGGAGGGAATTCCACCAGATCAG 1691773 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 ||| | | || || ||||| ||||| |||||||| | | | ||| || ||||| || Sbjct 1691772 CAGAGATTGATCTTTGCTGGAAAACAATTGGAAGA-TGGACGCACTCTGTCAGATTACAA 1691714 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||| |||||||| || || ||||| ||||| ||| |||| || |||| Sbjct 1691713 CATTCAGAAAGAATCCACACTGCATCTTGTACTCAGATTGAGAGGAGGTA 1691664 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || ||||||||||| ||||| ||||| | || || ||| | ||| Sbjct 1691664 ATGCAAATTTTTGTCAAAACTCTGACAGGTAAAACCATCACACTTGAGGTCGAAGCCTCC 1691605 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || || | ||| ||||| ||||| | || || || || Sbjct 1691604 GACACAATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGAATTCCCCCAGATCAA 1691545 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| || |||||| | |||||| | ||| || || || || Sbjct 1691544 CAGCGTCTCATTTTCGCCGGAAAACAGCTTGAAGACGGTCGCACTTTGTCAGACTACAAT 1691485 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTA 31402 |||||||| || ||||| || ||| | ||| Sbjct 1691484 ATTCAAAAGGAGTCGACACTGCATTTAGTA 1691455 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || ||||||||||| ||||| || ||||| | || |||||| | || Sbjct 1690981 CATGCAGATTTTTGTCAAGACTCTGACTGGCAAGACTATCACATTGGAGGTTGAAGCTTC 1690922 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | |||| |||||| | || || || || || | || || ||||| Sbjct 1690921 TGACACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAGGGAATCCCACCAGACCA 1690862 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||| || || ||||||||||| | || || | ||| | || || || Sbjct 1690861 ACAGCGTCTCATCTTTGCTGGCAAACAACTTGAGGATGGTCGCACTCTATCTGACTACAA 1690802 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||||| || ||| | ||| | ||| | | ||| | || |||| Sbjct 1690801 TATTCAGAAAGAGTCAACTTTGCATTTAGTATTACGTCTGCGAGGTGGTA 1690752 Score = 95.1 bits (104), Expect = 1e-14 Identities = 165/235 (70%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || || || ||||| ||||| || ||||| ||||| | || || || | Sbjct 1692124 AAAAATGCAGATCTTTGTGAAGACGCTGACTGGTAAAACCATCACATTGGAGGTCGAGGC 1692065 Query 31249 GTCCGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 ||||||| | |||| || || || ||| | | |||| || ||| | || || | Sbjct 1692064 ATCCGACACCATTGAAAATGTTAAGGCAAAGATTCAAG-ACAAAGAGGGCATCCCCCCAG 1692006 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGAT 31366 |||||||| | | || || || || || ||| | ||||| | | | || || ||| Sbjct 1692005 ACCAGCAGAGATTGATCTTTGCAGGAAAGCAGCTCGAAGA-TGGACGCACCTTGTCTGAT 1691947 Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||||||| || ||||| || || || || ||||| ||| |||| || |||| Sbjct 1691946 TATAACATTCAGAAGGAATCCACACTCCACCTTGTACTCAGATTGAGAGGTGGTA 1691892 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || || || |||| || ||||| || || | || || || | || Sbjct 1691437 CATGCAAATCTTTGTTAAAACATTGACTGGTAAAACCATTACTTTGGAAGTCGAGGCCTC 1691378 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| ||||| | || ||||| ||||| | || || || || Sbjct 1691377 AGACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCA 1691318 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| |||| || ||||| || ||||||||||| | || || || ||||| Sbjct 1691317 GCAGCGTTTAATTTTTGCTGGTAAGCAGTTGGAAGATGGTCGCACATTGTCGGACTATAA 1691258 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||||||||| || || || || ||||||| Sbjct 1691257 TATTCAAAAAGAGTCCACCCTCCACTTGGTACT 1691225 >seq56 Length=4197193 Score = 100 bits (110), Expect = 3e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 23409 CTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGA 23468 |||| || || || ||||| | ||| | ||| || || | |||||||||||| || || | Sbjct 1120527 CTTTACCTGTATTTTTTTTGAGATCAAGAAATTCAAAAATGTCCGCATGCCAAGGTTCAA 1120468 Query 23469 GGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGT 23528 | || | ||||| || || || |||||||| || || || || || || || || |||| Sbjct 1120467 GATACATTGCAAAAGCTCCTGGCCTCTTATTACCTCCTTGGTCAACATAGCGTGCTGTGT 1120408 Query 23529 TGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACAC 23588 | || |||||||||| ||| || || | ||| || || | || | || || | | Sbjct 1120407 TATTATACACTCTTAACATAGGAACTAAACCATTAGAAACTCCATTTGTTCCGGCAATTC 1120348 Query 23589 TCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTT 23643 | | ||| || |||| | |||| || ||||| |||||||| | ||||| Sbjct 1120347 TTGTACCCTTGGCTCTGATTGTGTGGACACTCAAACCAATGCCTCCAGCAGATTT 1120293 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 23006 ACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTG 23065 |||||| | || || || || || || | ||| || || ||||| || || || | | Sbjct 1121073 ACAAACATATTAACAGCAATTGATGCCAAATTACAAACTGCCACTTCATCAGGTGATGAG 1121014 Query 23066 TACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTG 23125 |||| ||||| || ||||||| ||| |||| | || ||||||||||| || ||| Sbjct 1121013 TACTGTACAACCTCAGTACATAAATTACTACTTCTGATTGTGCCCAAATTTTGTTGATTG 1120954 Query 23126 CTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGAC 23185 ||| ||||| || | ||| ||||| | |||||| || || || || || || || ||| Sbjct 1120953 GATTTACGATTACAAGCATCTTTGTATAACATGTATGGTGTTCCAGTTTCTACTTGTGAC 1120894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764410767440