Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq211 107 4e-18 >seq211 Length=1509898 Score = 107 bits (118), Expect = 4e-18 Identities = 184/265 (69%), Gaps = 8/265 (3%) Strand=Plus/Plus Query 35223 TTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGT 35282 |||| || | || || |||| | | || ||| | ||||| || |||||||| |||| Sbjct 52689 TTCCTCTTTTAACGACAAAGAGAGTATTTTGGCGCGGAGTGGTCGAAGAACTACTTTGGT 52748 Query 35283 TCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACG 35342 | || | ||| || | ||||||||||| | | || | || ||||| ||| | | Sbjct 52749 TTATTAAGGGTTCAACGAATGCCAAAGAATTATCTGATAAAGATATTCACATATGGGATG 52808 Query 35343 CTAATGGGTCGCGGGAATTTTTGGA---CAGTAGAGGGTTATAC-GATAGAGCAGAGGGA 35398 ||||| | ||||| |||||||| || | || |||| ||| ||||||| || || Sbjct 52809 CTAATAGCTCGCGAGAATTTTTAGATTCCTGT----GGTTTTACGGATAGAGAAGTTGGC 52864 Query 35399 GATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGT 35458 ||||| ||||| || || ||||| || ||| | |||||||| || |||||| | | Sbjct 52865 GATTTAGGACCGGTTTATGGATTTCAGTGGAGGCATTTTGGAGCAAAATATGTCAACATG 52924 Query 35459 TCTTCCGATTATACTGGAAAGGGTA 35483 | | |||||||||||| | |||| Sbjct 52925 CATACAGATTATACTGGACAAGGTA 52949 Score = 89.7 bits (98), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 35522 AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATG 35581 || |||||||||||||| || |||||| | || |||||||| || || ||| | ||| Sbjct 53074 AAACCAGATGATAGAAGAATCATTATGTCAGCTTGGAATCCAATTGACATTCCAATAATG 53133 Query 35582 GCTCTTCCTCCATGCCA--CATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGT 35639 ||||| || || || || ||| | ||| ||||| || |||||||||||| | || | Sbjct 53134 GCTCTCCCACCTTGTCATGCAT--TGGTTCAGTTTTACGTTGCTAATGGAGAACTTTCTT 53191 Query 35640 GCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCAT 35699 | || | ||||| |||| | || | || | || || || || ||||| || |||| Sbjct 53192 GTCAACTTTATCAAAGAAGTGCTGACATGGGACTTGGTGTACCATTTAATATAGCTTCAT 53251 Query 35700 ACTCTCTTCTGACTCATCTGATGGC 35724 | || | |||| || |||| || Sbjct 53252 ATTCCTTATTGACATATATGATAGC 53276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989579473580935