Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq211 147 2e-30 >seq211 Length=1509898 Score = 147 bits (162), Expect = 2e-30 Identities = 215/301 (71%), Gaps = 5/301 (2%) Strand=Plus/Minus Query 21281 GTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCG 21340 ||||| |||||||| || ||||||||||| ||||| ||||| |||| ||||| | Sbjct 51110 GTACTTGGCCCCAAAGTGCCTCCACTGGAAGCCGTAAACCGGGCCCAAGTCGCCGACCTC 51051 Query 21341 GCGGTCCCCGAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTT 21400 ||| |||| |||||| ||| | | ||| |||| ||| ||| |||||||||||||| Sbjct 51050 GCGATCCCGGAAGCCGAGCGAATCGAGAAACTCGCGAGACGCGTTGGCGTCCCAAATTTT 50991 Query 21401 TACGCC-GCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACT 21459 | || |||| || || ||| ||| || ||| ||||| | ||| ||||| |||| || Sbjct 50990 AATACCTTTGGCG-GAGAGCTCGTTGGCGTTGGTCGAGCCACGGATGAACCAGAGCAGCT 50932 Query 21460 CCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAACT---CGTCCC 21516 |||| ||||| | | |||||| || || ||||| || | || ||||| | |||| | Sbjct 50931 CCTCGGCGACGGCGCGCCAAAATACTCTCTTGGTCGTCAGAAGCGGAAATTGGCCGTCTC 50872 Query 21517 TGAGGTTATATCGGGCCTGAAGCCCGAACACGGACCTGGTGCCCACGCCCGTCCTGTCCT 21576 | ||| | | || |||| ||||| || || |||||| ||||| || | ||| | Sbjct 50871 TCAGGCTGAAGCGCATCTGAGTACCGAATACTGAATGGGTGCCGACGCCGGTGCGGTCGT 50812 Query 21577 C 21577 | Sbjct 50811 C 50811 Score = 102 bits (112), Expect = 7e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 21000 ACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGG 21059 ||||| || |||| | || || || | |||| ||| ||||| || || ||||| || Sbjct 51455 ACGTGCGCTATCATGCAGGTGAGCAGCGAGTAGGAGGCAATGTTGAAGGGCACCCCCAGA 51396 Query 21060 CCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAAC 21119 ||||||||| ||| ||||||||||| || ||||| ||||| || ||||||||| Sbjct 51395 CCCATGTCGCCGGCCCTCTGGTACAAGTGACAGGAGAGCTCGCCGTTGCAGACGTAAAAC 51336 Query 21120 TGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCG 21179 || || ||| || || || || |||||| || || ||| | || ||||| ||| Sbjct 51335 TGGGCCAGCGAGTGGCAGGGCGGCAGGGCCATCTTCGGGATGTCGACCGGATTCCAGGCG 51276 Query 21180 CACATAACGATGCGCCGATCGTGGGG 21205 | ||| | |||||| | |||| ||| Sbjct 51275 CTCATGATGATGCGTCTGTCGTCGGG 51250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427774138773360