Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq34 212 6e-50 >seq34 Length=2688268 Score = 212 bits (234), Expect = 6e-50 Identities = 363/525 (69%), Gaps = 4/525 (1%) Strand=Plus/Plus Query 13894 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951 ||||||| | | ||| ||||| || ||||| || | ||||||||| || ||||| || Sbjct 1149186 CCTCATCGCGAGAAATTAGTTCATTGCTGAAA--GTAAGTCCTGGCATTAAACCTCGCTT 1149243 Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011 || ||||||||||| |||||||| || ||||| ||||| ||||| || ||||| Sbjct 1149244 CTTCAACCAAAATATGGCAGCAAAACTACCACTGAAGAAAATTCCTTCAACAGCTGCAAA 1149303 Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071 ||||| | ||| || |||| | || | || | ||||| || ||||||| | Sbjct 1149304 AGCTATAACTCGCTCAGCAAATGTAGCACTCTTATGACTGATCCAGTTCATAGCCCAGTT 1149363 Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTT 14131 || ||| || ||| | || | |||||||| ||||| || || || ||| ||| Sbjct 1149364 AGCTTTCTTGGTAACACAAGGTAGAGTTTCAATTGCATTGAACAAGTAGTCCCTCTGAGA 1149423 Query 14132 AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCAT 14191 | | | |||||| ||||||||||| | ||||||||| ||||| | |||||||| Sbjct 1149424 TGGATCAGTAATGTAGGTATCAATAAGAAGTGAATACATTTCTGAGTGCACATTTTCCAT 1149483 Query 14192 AGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCT 14251 |||| || || ||||| ||||| | ||| || | ||| |||||| | |||| Sbjct 1149484 GGCTACTTGGAAGCCATAGAAGCAGCGAGCCTCAGTGACTTGAACTTCCTGGCTGAATCG 1149543 Query 14252 TTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTT 14311 || | | ||||||||| || || |||||| || ||||| ||||| |||| | Sbjct 1149544 CTCAACGAGATTTTCATTGACAATGCCATCAGAGGCAGCAAAGAATGCTAATACATGAGA 1149603 Query 14312 AATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATC 14371 |||||| | || ||| | | || | ||| ||||||| | |||||| || | || Sbjct 1149604 AATAAAATGTTTCTCGTTGTCATTCAACTTTGCCCAATCGTGCATATCCTTTGATAAGTC 1149663 Query 14372 TACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACAT 14416 |||||| || || |||||||| ||| ||||||| || ||||| Sbjct 1149664 TACTTCTTCGACCGTCCAAAATGAAGCCTCAGCTTTCTTGTACAT 1149708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479725859213800