Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq34 201 1e-46 >seq34 Length=2688268 Score = 201 bits (222), Expect = 1e-46 Identities = 410/603 (68%), Gaps = 12/603 (2%) Strand=Plus/Plus Query 13682 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13739 ||||||| | | ||| ||||| || ||||| || | ||||||||| || ||||| || Sbjct 1149186 CCTCATCGCGAGAAATTAGTTCATTGCTGAAA--GTAAGTCCTGGCATTAAACCTCGCTT 1149243 Query 13740 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799 || ||||||||||| ||||| || || ||||| ||||| ||||| || ||||| Sbjct 1149244 CTTCAACCAAAATATGGCAGCAAAACTACCACTGAAGAAAATTCCTTCAACAGCTGCAAA 1149303 Query 13800 CGCTATTAGTCGTTCTCCAAACGATGC--TTTTTTGTTTGATATCCATTTTCTAGCCCAT 13857 ||||| | ||| || |||| | || | || || |||| ||| || ||||||| Sbjct 1149304 AGCTATAACTCGCTCAGCAAATGTAGCACTCTTATGACTGAT--CCAGTTCATAGCCCAG 1149361 Query 13858 TCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCT 13917 | || ||| || ||| | || | ||||| ||||||||||| || | ||| ||| Sbjct 1149362 TTAGCTTTCTTGGTAACACAAGGTAGAGTTTCAATTGCATTGAACAAGTAGTCCCTCTGA 1149421 Query 13918 TTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCT 13977 | | | |||||| ||||||||||| | ||||||||| ||||| | ||||| Sbjct 1149422 GATGGATCAGTAATGTAGGTATCAATAAGAAGTGAATACATTTCTGAGTGCACATTTTCC 1149481 Query 13978 ATAGCTATCTGAAAACCATAAAAACATCTAGCTTC--TGACCATTGTACCTCCGAGTAAA 14035 || |||| || || ||||| || || | ||| || |||| ||| || ||| | | Sbjct 1149482 ATGGCTACTTGGAAGCCATAGAAGCAGCGAGCCTCAGTGAC--TTGAACTTCCTGGCTGA 1149539 Query 14036 ATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGT 14095 ||| || | | |||||||| ||||| |||||| || ||||| ||||| |||| | Sbjct 1149540 ATCGCTCAACGAGATTTTCATTGACAATGCCATCAGAGGCAGCAAAGAATGCTAATACAT 1149599 Query 14096 TTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAA 14155 |||||| | || ||| | | || | ||| ||||||| | |||||| || | Sbjct 1149600 GAGAAATAAAATGTTTCTCGTTGTCATTCAACTTTGCCCAATCGTGCATATCCTTTGATA 1149659 Query 14156 GATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTT 14215 |||||||| || || |||||||| ||| ||||||| || ||||| ||| || | Sbjct 1149660 AGTCTACTTCTTCGACCGTCCAAAATGAAGCCTCAGCTTTCTTGTACATGTGCCAAATAT 1149719 Query 14216 CTTTATATAATATAGGAAAAACTACAAATCTTGAAGATGTTTCTTTAAGAATTGGCTCCA 14275 | || || ||||| | || || | |||| |||| || || | |||||||| Sbjct 1149720 CAGGCCATTGAATGGGAAAGATCACGAAACGAGAAGGATTTTCCTTGAGCAATGGCTCCA 1149779 Query 14276 TTT 14278 || Sbjct 1149780 GTT 1149782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478586664297480