Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq34 152 8e-32 seq211 84.2 3e-11 >seq34 Length=2688268 Score = 152 bits (168), Expect = 8e-32 Identities = 368/546 (67%), Gaps = 17/546 (3%) Strand=Plus/Minus Query 125015 TGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGA 125074 ||| |||||| | |||||||| || ||| |||| || ||||||||||||||||| || || Sbjct 1149721 TGATATTTGGCACATGTACAAGAAAGCTGAGGCTTCATTTTGGACGGTCGAAGAAGTAGA 1149662 Query 125075 TCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTAT 125134 | || ||||| || ||||||||| | |||| ||| | ||| | | ||||| Sbjct 1149661 CTTATCAAAGGATATGCACGATTGGG---CAAAGTTGAATGACAACGAGAAACATTTTAT 1149605 Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193 || || | || || |||||||| | ||| ||||| || ||||| || ||||| ||||| Sbjct 1149604 TTCTCATGTATTAGCATTCTTTGCTGCCTCTGATGGCATTGTCAATGAAAATCTCGTTGA 1149545 Query 125194 CACGATTCTCTCAAG-AGTTGACCATTC-CAGAGGTGTCG-TGCTTTTACGGATTCCAAA 125250 |||||| || | |||| | | || | |||| ||| ||||| || || |||||| Sbjct 1149544 -GCGATTCAGCCAGGAAGTT--CAAGTCACTGAGG-CTCGCTGCTTCTATGGCTTCCAAG 1149489 Query 125251 TCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCG 125310 | || || || |||||||| |||||||| || || ||||| | |||||| | Sbjct 1149488 TAGCCATGGAAAATGTGCACTCAGAAATGTATTCACTTCTTATTGATACCTACATTACTG 1149429 Query 125311 ATC---CGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTA 125367 ||| | || | | || || || || ||||| || || | || | | | | Sbjct 1149428 ATCCATCTCAGAGGGACTACTTG---TTCAATGCAATTGAAACTCTACCTTGTGTTACCA 1149372 Query 125368 AAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGAC 125427 | || ||| | |||| || |||||| | | | | || | | || || || Sbjct 1149371 AGAAAGCTAACTGGGCTATGAACTGGATCAGTCATAAGAGTGCTACATTTGCTGAGCGAG 1149312 Query 125428 TGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTT 125487 | | || || || || || || || || ||||| ||||||||||| ||||| |||| Sbjct 1149311 TTATAGCTTTTGCAGCTGTTGAAGGAATTTTCTTCAGTGGTAGTTTTGCTGCCATATTTT 1149252 Query 125488 GGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAG 125547 || | |||||||| || | ||||| ||||| || ||| || || | || ||||| | Sbjct 1149251 GGTTGAAGAAGCGAGGTTTAATGCCAGGACTTACTTTCAGCAATGAACTAATTTCTCGCG 1149192 Query 125548 ACGAGG 125553 | |||| Sbjct 1149191 ATGAGG 1149186 >seq211 Length=1509898 Score = 84.2 bits (92), Expect = 3e-11 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 69903 TGACGACCAAGACTGTCTTTGTCAAGGGCGTCATCGAGGAGCTCTTGTGGATGATTTCCG 69962 |||||||||||| || ||| | |||| ||||||||| | ||| | || | Sbjct 50893 TGACGACCAAGAGAGTATTTTGGCGCGCCGTCGCCGAGGAGCTGCTCTGGTTCATCCGTG 50952 Query 69963 GATCGACCAATGCCAAAGAGCTGAGCCGAAAGGGTGTACACATTTGGAGCGGCAACAGTA 70022 | |||||||| ||||| ||||| | || ||| | | |||||| || |||| Sbjct 50953 GCTCGACCAACGCCAACGAGCTCTCCGCCAAAGGTATTAAAATTTGGGACGCCAACGCGT 51012 Query 70023 GTCGAAGCGTTT-TGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCA 70081 ||| | |||| | ||||||||||||||| || | | | ||||| |||| || Sbjct 51013 CTCGC-GAGTTTCTCGATTCGCTCGGCTTCCGGGATCGCGAGGTCGGCGACTTGGGCCCG 51071 Query 70082 GTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126 || ||||| |||||||||||||||| || ||||||| || ||| Sbjct 51072 GTTTACGGCTTCCAGTGGAGGCACTTTGGGGCCAAGTACGTGGAC 51116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055893023320