Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq89 131 1e-25 seq336 118 8e-22 seq256 116 3e-21 seq222 87.8 1e-12 >seq89 Length=3244750 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||| ||||| | | || |||||||| || || || || ||||| || ||||| || Sbjct 1691436 TGCCTCCTCTAAGACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTG 1691495 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 | | | | ||||||| | ||||| || ||| | || | ||| ||||| || | Sbjct 1691496 ACAAAGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGG 1691555 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||||||||||||||| ||||||| ||| || |||| || || ||| ||| | Sbjct 1691556 GAATTCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGA 1691615 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 | || | || ||||||||||||||||||||||| ||||||||||||||| Sbjct 1691616 CCTCAAGTGTGATGGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCATA 1691665 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||||||||| | || | ||| || ||||| ||||| || ||||||||||| Sbjct 1691666 CCTCCTCTCAATCTGAGTACAAGATGCAGTGTGGATTCTTTCTGAATGTTGTAATCTGAC 1691725 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | ||||| |||||||| ||||| | ||||| | || || || |||| Sbjct 1691726 AGAGTGCGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGTGGA 1691785 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 ||||| || || || ||||||| ||| ||| | || || ||||| | || || Sbjct 1691786 ATTCCCTCCTTATCTTGAATTTTGGCCTTAACATTCTCAATAGTATCTGAAGACTCAACC 1691845 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||||||||| || || |||||||| || ||||| ||||||||| Sbjct 1691846 TCAAGGGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCATA 1691893 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||| || | ||| |||||||| | || || ||||| || || ||||| || | Sbjct 1690754 CCACCTCGCAGACGTAATACTAAATGCAAAGTTGACTCTTTCTGAATATTGTAGTCAGAT 1690813 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | || || | |||||||||||| | || | ||| |||||||| ||| Sbjct 1690814 AGAGTGCGACCATCCTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGTGGG 1690873 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 ||||| ||||| || ||| || ||| || ||| |||| || || || | ||| || Sbjct 1690874 ATTCCCTCTTTATCTTGAATCTTAGCT-TTGACATTTTCAATAGTGTCAGAAGCTTCAAC 1690932 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || || || || || |||||||| || |||||||| ||||| Sbjct 1690933 CTCCAATGTGATAGTCTTGCCAGTCAGAGTCTTGACAAAAATCTGCAT 1690980 Score = 102 bits (112), Expect = 6e-17 Identities = 153/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCG--CGTCT 15211 ||| || ||||| || || |||||||| ||||| ||||| | | ||| || | ||| Sbjct 1690999 AACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATC--TGACAATGTGCGACCATCT 1691056 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || |||||||| ||||| | || ||||| || ||||| || || ||||||||||| Sbjct 1691057 TCCAATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGGGATGCCTTCTTTGTCC 1691116 Query 15272 CAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330 |||||| ||| || ||| |||| || || || ||| || || | || || || Sbjct 1691117 TGAATTTTAGCT-TTCACATTTTCAATTGTGTCAGATGCTTCGACTTCAAGAGTTATAGT 1691175 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| || || || || || |||||||||||||| Sbjct 1691176 TTTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 1691208 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCG--CGTCTT 15212 || ||||| ||||| || || || || ||||| ||||| | ||| | || | || | Sbjct 1690544 ACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAATC--TGAGAGTGTACGTCCATCCT 1690601 Query 15213 CTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCAC 15272 | || || || ||||| | || | ||| |||||||| || || ||||| ||||| Sbjct 1690602 CCAACTGCTTACCAGCAAAAATTAGACGCTGTTGGTCTGGAGGGATACCTTCCTTGTCCT 1690661 Query 15273 AAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTT 15332 |||||| || ||| | || |||||||| | ||| || || || || ||||| | Sbjct 1690662 GGATTTTGGCTTTCACATTCTCAATGGTATCAGAAGCTTCAACCTCCAAAGTGATGGTCT 1690721 Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||| || ||||| ||||||||||| |||||| Sbjct 1690722 TACCAGTAAGAGTCTTTACAAAAATCTGCATA 1690753 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCG--CGTCTT 15212 || || || |||||||| |||||||| || || || || | ||| || | |||| Sbjct 1691228 ACCAAGTGGAGGGTGGACTCTTTTTGAATATTATAGTCCG--ACAATGTGCGACCATCTT 1691285 Query 15213 CTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCAC 15272 | || || || ||||| | || ||||| || || || ||| |||||||||||||| Sbjct 1691286 CCAACTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTT 1691345 Query 15273 AAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTT 15332 || ||| ||| ||| |||| || || || || || || || |||||||||| Sbjct 1691346 GGATCTTGGCCTTGACATTTTCAATTGTGTCTGAGGCCTCGACTTCCAAAGTAATGGTTT 1691405 Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||| |||| ||||| ||||| |||||||| Sbjct 1691406 TACCAGTCAATGTTTTAACAAAGATTTGCAT 1691436 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || ||||| || || || || || |||||||| || || | | | ||||| Sbjct 1689837 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGACAGTGTGCGTCCATCTTC 1689896 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | ||||| ||||| | || | ||| || || || ||||| ||||||||||| Sbjct 1689897 CAGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCTTG 1689956 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||| ||| ||| ||| |||| || || ||| | ||| || || ||||| ||||| || Sbjct 1689957 AATCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCACTTCCAAGGTGATGGTCTT 1690016 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||||| || || ||||| || |||||| Sbjct 1690017 TCCTGTCAATGTCTTGACAAAGATCTGCATA 1690047 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| | || | || || ||||| || || || ||||| ||||| Sbjct 1691894 CCACCTCTCAATCTGAGTACAAGGTGGAGTGTGGATTCCTTCTGAATGTTATAATCAGAC 1691953 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | | | ||||| | || || || || | ||||| | || ||||| || Sbjct 1691954 AAGGTGCGTCCATCTTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGG 1692013 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || || |||||||| ||| ||||| ||| ||| |||| ||||| ||| || || Sbjct 1692014 ATGCCCTCTTTGTCTTGAATCTTTGC-CTTAACATTTTCAATGGTGTCGGATGCCTCGAC 1692072 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367 || || || ||||||||||| ||||| || || ||||| || ||||| ||| Sbjct 1692073 CTCCAATGTGATGGTTTTACCAGTCAGCGTCTTCACAAAGATCTGCATTTTT 1692124 >seq336 Length=3726090 Score = 118 bits (130), Expect = 8e-22 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 15174 CTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATA 15233 ||||||| ||||||||||| ||| | | | |||||||||||||| ||||| | | Sbjct 1528380 CTTTTTGGATGTTGTAATCTTGGAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGA 1528439 Query 15234 TCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTT 15293 |||| | ||| || || ||||||||||| || || |||||| ||| ||| ||| Sbjct 1528440 TCAATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTT 1528499 Query 15294 CTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAA 15353 | || ||||| ||| || || |||||||| |||||||| |||| |||||| |||| Sbjct 1528500 CAATAGTATCAGAGGCTTCGACCTCCAAGGTAATAGTTTTACCAGTCAAAGTTTTGACAA 1528559 Query 15354 AAATTTGCATATT 15366 | || ||||| || Sbjct 1528560 AGATCTGCATTTT 1528572 >seq256 Length=3517054 Score = 116 bits (128), Expect = 3e-21 Identities = 158/217 (73%), Gaps = 5/217 (2%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCG--CGTCTT 15212 |||||||||||||| || || || || || ||||||||| | ||| || | |||| Sbjct 130803 ACTAAATGAAGGGTAGATTCCTTCTGAATATTGTAATCGG--ACAATGTACGTCCATCTT 130860 Query 15213 CTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCAC 15272 | |||||||| || ||| | ||||| | ||| ||||| ||||||||||| || || Sbjct 130861 CCAATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTATCTT 130920 Query 15273 AAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTT 15332 |||||| ||| ||| |||| ||| | || || || || | ||| ||||||| Sbjct 130921 GGATTTTGGCCTTGACATTTTCAATGCTGTCAGCCGCATCAACCTCAAGGGTGATGGTTT 130980 Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15369 | ||||| || ||||| ||||| |||||||| ||||| Sbjct 130981 TTCCTGTGAGTGTTTTCACAAAGATTTGCAT-TTTGA 131016 >seq222 Length=7060343 Score = 87.8 bits (96), Expect = 1e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268 ||||| |||||||| || || | ||||| | ||| || || || ||||||||||| Sbjct 1553894 TCTTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGATCTGGAGGGATTCCTTCTTTA 1553953 Query 15269 TCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATG 15328 || ||||| ||| ||| |||| || || || || || || ||||| ||| Sbjct 1553954 TCCTGGATTTTAGCCTTGACATTTTCAATAGTGTCAGAGGCCTCAACCTCCAAGGTGATG 1554013 Query 15329 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || ||||| |||| |||||| |||||||| |||||||| Sbjct 1554014 GTCTTACCAGTCAAAGTTTTAACAAAAATCTGCATATT 1554051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362177624180937