Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq89 100 2e-16 >seq89 Length=3244750 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGT 18898 |||| || |||||||||||||||||||| || | || || |||| || |||||| Sbjct 1691462 TGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGACAAAGTGCGACCGTCTTCAAGCTGT 1691521 Query 18899 TTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTC 18958 || || || |||| || | ||| ||||| ||| | || |||||||| |||||| Sbjct 1691522 TTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGAATTCCTTCTTTGTCTTGAATTTTG 1691581 Query 18959 TGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG-TTTCGACGGTAATGGTTTTACCTGT 19017 || || | | | || ||| ||||| || || | || |||||||||||||| Sbjct 1691582 GCCTTCACGTTTTCAATTGTGTCG-GAGGCTTCGACCTCAAGTGTGATGGTTTTACCTGT 1691640 Query 19018 TAAAGTTTTGACAAAAATTTGCAT 19041 | ||||||||||||||||||||| Sbjct 1691641 CAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC--- 18889 |||| ||| | || |||||||| || || ||||| || | || ||| |||||| Sbjct 1689838 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGACAGTGT----GCGTCCATC 1689893 Query 18890 -TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTC 18948 |||||||||||||| ||| | ||||| | ||||||||| || | ||| |||||||| Sbjct 1689894 TTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCTTTGTC 1689953 Query 18949 GGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGT 19008 ||| || || || | | | ||| ||| || ||| ||| | ||| ||||| Sbjct 1689954 TTGAATCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCACTTCCAAGGTGATGGT 1690013 Query 19009 TTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || ||||| || || |||||||| || ||||| Sbjct 1690014 CTTTCCTGTCAATGTCTTGACAAAGATCTGCAT 1690046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414570996219658