Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq89 118 7e-22 >seq89 Length=3244750 Score = 118 bits (130), Expect = 7e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 |||| ||||| || | || ||||||||||| || || ||||| ||||| || | Sbjct 1690994 CGCAGAACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATCTGACAATGTGCGACCA 1691053 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || |||||||| || ||| ||| |||||||| |||||||| | || ||||||||||| Sbjct 1691054 TCTTCCAATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGGGATGCCTTCTTTG 1691113 Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334 || ||| ||| || ||| ||| ||||| | || || || |||||||| Sbjct 1691114 TCCTGAATTTTAGCTTTCACATTTTCAATTGTGTCAGATGCTTCGACTTCAAGAGTTATA 1691173 Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||||||| || || || || || ||||||||||| Sbjct 1691174 GTTTTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 1691208 Score = 114 bits (126), Expect = 8e-21 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || ||||| | ||||| || ||||||| ||||||||| ||||| |||||||| || ||| Sbjct 1691438 CCTCCTCTAAGACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGAC 1691497 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 ||| || | ||| || | || ||||| || || | ||| || || || | ||| Sbjct 1691498 AAAGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGA 1691557 Query 33263 ATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319 || |||||||| || ||| |||| | || ||| ||| |||||| || || Sbjct 1691558 ATTCCTTCTTTGTCTTGAATTTTGGCCT---TCACGTTTTCAATTGTGTCGGAGGCTTCG 1691614 Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || ||||| || || |||||||| || ||||||||||| Sbjct 1691615 ACCTCAAGTGTGATGGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 ||||| || | || ||||||||||| ||||| || || ||||| || | || ||| Sbjct 1691228 ACCAAGTGGAGGGTGGACTCTTTTTGAATATTATAGTCCGACAATGTGCGACCATCTTCC 1691287 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCG 33277 || ||||| ||| ||| |||||||| ||||| || | || || |||||||| || | Sbjct 1691288 AACTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGG 1691347 Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 | | ||| || || ||| ||| ||||| || | || |||| ||| || ||| Sbjct 1691348 ATCTTGGCC---TTGACATTTTCAATTGTGTCTGAGGCCTCGACTTCCAAAGTAATGGTT 1691404 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || || || | ||||| || || ||||||||| Sbjct 1691405 TTACCAGTCAATGTTTTAACAAAGATTTGCATG 1691437 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 || || || || || | ||| ||||||||||| |||||||| || || | | | | Sbjct 1689604 CGTAATACTAAGTGAAGTGTAGACTCTTTTTGGATATTGTAGTCTGATAGAGTACGACCA 1689663 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || || | |||||| ||| ||| || ||||| |||||||| | || || ||||| || Sbjct 1689664 TCCTCAAGTTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAGGGATACCTTCCTTG 1689723 Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334 || ||| |||||| | | ||| || || | || ||| |||| || || Sbjct 1689724 TCCTGGATCTTGGCTTTTACATTCTCAATGGTATCAGAAGCTTCAACCTCCAATGTGATG 1689783 Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || |||||||| || || ||||| ||||| Sbjct 1689784 GTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 1689818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318776213018586