Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq123 91.5 1e-13 seq89 89.7 4e-13 >seq123 Length=3260300 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 20019 CTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAA 20078 |||||||||| || ||||| | ||| | ||||||||||||||| || || | | Sbjct 712125 CTTTTTGTATATTATAATCTTGAAGAGTGCGACCATCTTCCAATTGTTTACCAGCGAAGA 712184 Query 20079 TAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGC 20138 | | |||||| ||||| || | || |||||||| ||||| ||| || | Sbjct 712185 TCAACCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATTTTAGCTTTGACATTTT 712244 Query 20139 CAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAA 20198 ||| || ||| || ||| ||||| |||||||| ||||| || || |||||||||| Sbjct 712245 CAATAGTATCAGAAGCTTCAACTTCCAAAGTAATGGTCTTGCCAGTTAAAGTTTTGACAA 712304 Query 20199 AAATTTGCATTTT 20211 | || |||||||| Sbjct 712305 AGATCTGCATTTT 712317 >seq89 Length=3244750 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||||| | | ||| || ||||| ||||| || || ||||| || ||||| || | Sbjct 1691438 CCTCCTCTAAGACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGAC 1691497 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | ||||| | ||||| || || |||| || | ||||||||| ||| Sbjct 1691498 AAAGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGA 1691557 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| |||||| ||||| | ||| | ||| | ||| Sbjct 1691558 ATTCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGACC 1691617 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | || |||||||| || |||| |||||||||||||||||||| Sbjct 1691618 TCAAGTGTGATGGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||||| || || | || | ||| ||||| |||||||| || ||||||||||| | Sbjct 1691666 CCTCCTCTCAATCTGAGTACAAGATGCAGTGTGGATTCTTTCTGAATGTTGTAATCTGAC 1691725 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| ||||||||||||||| || ||| | || | ||||| ||||| || Sbjct 1691726 AGAGTGCGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGTGGA 1691785 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | || || || || |||||| || || | ||| || ||| || || Sbjct 1691786 ATTCCCTCCTTATCTTGAATTTTGGCCTTAACATTCTCAATAGTATCTGAAGACTCAACC 1691845 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | ||||||||| ||||| |||| || |||||||| |||||||| Sbjct 1691846 TCAAGGGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 1691892 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 ||||| || || || || |||||||| ||||| ||||| || || | ||||||| Sbjct 1691000 ACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATCTGACAATGTGCGACCATCTTCC 1691059 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 |||||||| || ||| |||| | | ||| || || || | |||||||||||| | Sbjct 1691060 AATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGGGATGCCTTCTTTGTCCTGA 1691119 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 ||||| |||||| | ||| | || | ||| ||| | || || ||||| Sbjct 1691120 ATTTTAGCTTTCACATTTTCAATTGTGTCAGATGCTTCGACTTCAAGAGTTATAGTTTTT 1691179 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || || | || |||||||||||||||||| Sbjct 1691180 CCAGTGAGGGTCTTGACAAAAATTTGCATT 1691209 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 ||||| || || || || || || || |||||||| || || || ||||||| Sbjct 1689838 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGACAGTGTGCGTCCATCTTCC 1689897 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | ||||| || ||| | ||||| | ||| ||||| || | |||||||||||| | Sbjct 1689898 AGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCTTGA 1689957 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 || || || || | ||| || ||| || |||| ||||| ||| ||||| || Sbjct 1689958 ATCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCACTTCCAAGGTGATGGTCTTT 1690017 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || ||||| || |||||||| || ||||| Sbjct 1690018 CCTGTCAATGTCTTGACAAAGATCTGCAT 1690046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419585374402317