Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq34 203 3e-47 >seq34 Length=2688268 Score = 203 bits (224), Expect = 3e-47 Identities = 368/528 (70%), Gaps = 14/528 (3%) Strand=Plus/Plus Query 13187 ATTAGCTCGTT--TGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATA 13244 ||||| || || ||||| || || || ||||| | ||||| || || | |||||||| Sbjct 1149200 ATTAGTTCATTGCTGAAA--GTAAGTCCTGGCATTAAACCTCGCTTCTTCAACCAAAATA 1149257 Query 13245 TAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTT 13304 | |||||||| ||| || || ||||||||||| |||||||| ||||| | | | Sbjct 1149258 TGGCAGCAAAACTACCACTGAAGAAAATTCCTTCAACAGCTGCAAAAGCTATAACTCGCT 1149317 Query 13305 CACCATACGTACTATTTTTACTCTCT-ATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTA 13363 || || | ||| | | ||| | || ||||| || | |||||||| ||||| | || Sbjct 1149318 CAGCAAATGTAGCACTCTTA-TGACTGATCCAGTTCATAGCCCAGTTAGCTTTCTTGGTA 1149376 Query 13364 ACGCAGTTCATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTAC-TGTCTAA--A 13420 || || | | |||| ||||| || || || || | | || | || | | | Sbjct 1149377 ACACAAGGTAGAGTTTCAATTGCATTGAACAAGTAGTCCCT---CTGAGATGGATCAGTA 1149433 Query 13421 ATATAAGTATCTATCAATAAGCTA-TACATTTCTGAATGAATATTTTCCATCGCTATTTG 13479 || || ||||| || || ||| | ||||||||||| || | ||||||||| |||| ||| Sbjct 1149434 ATGTAGGTATCAAT-AAGAAGTGAATACATTTCTGAGTGCACATTTTCCATGGCTACTTG 1149492 Query 13480 GAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAA 13539 ||| ||||| || || | |||||| | || |||||||| | |||| || | | Sbjct 1149493 GAAGCCATAGAAGCAGCGAGCCTCAGTGACTTGAACTTCCTGGCTGAATCGCTCAACGAG 1149552 Query 13540 GTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttt 13599 ||||| || || || || ||| |||||||| || || | || || |||||| | Sbjct 1149553 ATTTTCATTGACAATGCCATCAGAGGCAGCAAAGAATGCTAATACATGAGAAATAAAATG 1149612 Query 13600 tttttCGTTTTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTC 13659 ||| ||||| || ||||||| |||||| | | ||| |||||||| ||||| || || Sbjct 1149613 TTTCTCGTTGTCATTCAACTTTGCCCAATCGTGCATATCCTTTGATAAGTCTACTTCTTC 1149672 Query 13660 AACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATC 13707 || |||||||| ||||| |||| ||||| ||||| ||| ||||| Sbjct 1149673 GACCGTCCAAAATGAAGCCTCAGCTTTCTTGTACATGTGCCAAATATC 1149720 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 ||||| ||||| | |||| | |||||||| || ||||| |||||||| || ||||| | | Sbjct 1148720 TTTTGGTATTCTCCAACTTTCTTTTCAAAGAAATTTGTCTTTCCTTCCAATGAAATTTGT 1148779 Query 12920 TCCATAAAATCGAAAGGATTTTTCGA 12945 ||||| || ||||||||||| | ||| Sbjct 1148780 TCCATGAAGTCGAAAGGATTCTCCGA 1148805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430980524822514