Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq89 190 5e-43 seq336 145 2e-29 seq123 143 6e-29 seq34 138 3e-27 seq256 131 4e-25 seq222 129 1e-24 seq1 102 2e-16 >seq89 Length=3244750 Score = 190 bits (210), Expect = 5e-43 Identities = 168/210 (80%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||||| ||| || || || |||||||||||||| |||||||||||||| | ||| || || Sbjct 1690771 TACTAAATGCAAAGTTGACTCTTTCTGAATATTGTAGTCAGATAGAGTGCGACCATCCTC 1690830 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 |||||||| |||||||| || || | |||||| || || || ||||| |||||||| || Sbjct 1690831 AAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATTCCCTCTTTATCTTG 1690890 Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529 |||||| ||||| |||||||| | || || || ||| ||||| | ||| |||||||| Sbjct 1690891 AATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCAACCTCCAATGTGATAGTCTT 1690950 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| |||||||| Sbjct 1690951 GCCAGTCAGAGTCTTGACAAAAATCTGCAT 1690980 Score = 176 bits (194), Expect = 1e-38 Identities = 165/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||||| || | |||||| ||||| || ||||| ||||| |||||||| | ||| || || Sbjct 1689609 TACTAAGTGAAGTGTAGACTCTTTTTGGATATTGTAGTCTGATAGAGTACGACCATCCTC 1689668 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 ||||| || ||||||||||| | | ||| || || ||||| || ||||| || ||||| Sbjct 1689669 AAGTTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTG 1689728 Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529 ||||| ||||||||||| || | |||||| || ||| ||||| | ||| || ||||| Sbjct 1689729 GATCTTGGCTTTTACATTCTCAATGGTATCAGAAGCTTCAACCTCCAATGTGATGGTCTT 1689788 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||||||| || || ||||| |||||||| Sbjct 1689789 ACCAGTAAGAGTCTTAACAAAAATCTGCAT 1689818 Score = 163 bits (180), Expect = 7e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | | ||||| ||| | ||| || || || |||||||| ||||| Sbjct 1691435 ATGCCTCCTCTAAGACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCT 1691494 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | ||| | ||||||||| || |||||||| || ||||| || | ||||||||| || Sbjct 1691495 GACAAAGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGG 1691554 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || ||||| || || || || ||||| | || ||| | ||| Sbjct 1691555 GGAATTCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCG 1691614 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| ||||| || || ||||| || || ||||| ||||| || ||||| Sbjct 1691615 ACCTCAAGTGTGATGGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 163 bits (180), Expect = 7e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | || ||||| ||||| | ||| |||||||||||||| || || || Sbjct 1691663 ATACCTCCTCTCAATCTGAGTACAAGATGCAGTGTGGATTCTTTCTGAATGTTGTAATCT 1691722 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | || ||||| | ||||||||||||||| || | ||||| ||||| || Sbjct 1691723 GACAGAGTGCGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGT 1691782 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| || ||||| ||||| || || || ||||| || | ||||| || || Sbjct 1691783 GGAATTCCCTCCTTATCTTGAATTTTGGCCTTAACATTCTCAATAGTATCTGAAGACTCA 1691842 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || ||||| ||||| ||||| || || || ||||| || ||||| Sbjct 1691843 ACCTCAAGGGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 1691892 Score = 154 bits (170), Expect = 3e-32 Identities = 174/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | || ||||| || || | ||| ||||| |||||||| ||||| ||| Sbjct 1691891 ATACCACCTCTCAATCTGAGTACAAGGTGGAGTGTGGATTCCTTCTGAATGTTATAATCA 1691950 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | || ||||| || || ||||| ||||| || | ||||| || || || Sbjct 1691951 GACAAGGTGCGTCCATCTTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGG 1692010 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || ||||| || ||||||||||| || |||||||| | ||| ||| | || Sbjct 1692011 GGGATGCCCTCTTTGTCTTGAATCTTTGCCTTAACATTTTCAATGGTGTCGGATGCCTCG 1692070 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||||| | ||| || || |||||||| || || || ||||| ||||||||||| Sbjct 1692071 ACCTCCAATGTGATGGTTTTACCAGTCAGCGTCTTCACAAAGATCTGCATTTT 1692123 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| ||||| || || || || | || || || | || || ||| Sbjct 1690556 GTTGACTCCTTCTGAATGTTATAATCTGAGAGTGTACGTCCATCCTCCAACTGCTTACCA 1690615 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||||||||| | |||||| || ||||| || ||||| || ||||| || || ||||| Sbjct 1690616 GCAAAAATTAGACGCTGTTGGTCTGGAGGGATACCTTCCTTGTCCTGGATTTTGGCTTTC 1690675 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| || ||| ||||| | || || |||||||||||||| || Sbjct 1690676 ACATTCTCAATGGTATCAGAAGCTTCAACCTCCAAAGTGATGGTCTTACCAGTAAGAGTC 1690735 Query 104543 TTTACAAATATCTGCAT 104559 |||||||| |||||||| Sbjct 1690736 TTTACAAAAATCTGCAT 1690752 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||| || || ||||| || || | || | ||| ||||| | |||||| ||| Sbjct 1691012 GTTGACTCTTTTTGGATGTTATAATCTGACAATGTGCGACCATCTTCCAATTGTTTACCA 1691071 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||||| | ||| || || ||||| || |||||||| |||||||| || ||||| Sbjct 1691072 GCAAAAATTAAACGCTGCTGGTCTGGAGGGATGCCTTCTTTGTCCTGAATTTTAGCTTTC 1691131 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | || || | ||| || || || || ||||| || ||||| || || Sbjct 1691132 ACATTTTCAATTGTGTCAGATGCTTCGACTTCAAGAGTTATAGTTTTTCCAGTGAGGGTC 1691191 Query 104543 TTTACAAATATCTGCATT 104560 || ||||| || |||||| Sbjct 1691192 TTGACAAAAATTTGCATT 1691209 Score = 131 bits (144), Expect = 4e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | ||||| | || | || || ||||| |||||||||||||| Sbjct 1691207 ATTCCACCACGCAGACGGAGTACCAAGTGGAGGGTGGACTCTTTTTGAATATTATAGTCC 1691266 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | ||| ||||| | || || ||||||||||||| | ||| ||||| || Sbjct 1691267 GACAATGTGCGACCATCTTCCAACTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGT 1691326 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || || ||||| || || |||||||| | || || | || Sbjct 1691327 GGGATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCTGAGGCCTCG 1691386 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | ||||| || |||||||| | |||||| ||||| || ||||| Sbjct 1691387 ACTTCCAAAGTAATGGTTTTACCAGTCAATGTTTTAACAAAGATTTGCAT 1691436 >seq336 Length=3726090 Score = 145 bits (160), Expect = 2e-29 Identities = 149/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 |||| || || || || || ||||| | ||| ||||||| ||||||||||||||| | Sbjct 1528380 CTTTTTGGATGTTGTAATCTTGGAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGA 1528439 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | | || || ||||| ||||| |||||||| ||||| || || || || || ||||||| Sbjct 1528440 TCAATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTT 1528499 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 | | ||||| | ||| ||||| | |||||||| |||||||| | ||||| |||| Sbjct 1528500 CAATAGTATCAGAGGCTTCGACCTCCAAGGTAATAGTTTTACCAGTCAAAGTTTTGACAA 1528559 Query 104550 ATATCTGCATTTTGT 104564 | ||||||||||||| Sbjct 1528560 AGATCTGCATTTTGT 1528574 >seq123 Length=3260300 Score = 143 bits (158), Expect = 6e-29 Identities = 148/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 |||| || |||||||| || ||||| | ||| ||||| | |||||| ||||| || | Sbjct 712125 CTTTTTGTATATTATAATCTTGAAGAGTGCGACCATCTTCCAATTGTTTACCAGCGAAGA 712184 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | | |||||| ||||| ||||| ||||| ||||| || || || || ||||| ||||||| Sbjct 712185 TCAACCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATTTTAGCTTTGACATTTT 712244 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 | | ||||| || ||| || || | ||||| ||||| ||||| | ||||| |||| Sbjct 712245 CAATAGTATCAGAAGCTTCAACTTCCAAAGTAATGGTCTTGCCAGTTAAAGTTTTGACAA 712304 Query 104550 ATATCTGCATTTTG 104563 | |||||||||||| Sbjct 712305 AGATCTGCATTTTG 712318 >seq34 Length=2688268 Score = 138 bits (152), Expect = 3e-27 Identities = 363/542 (67%), Gaps = 19/542 (4%) Strand=Plus/Minus Query 268703 TTTGTGATATTTCCAATACAGCATGG--TGATATATGGAGGATGTACAAACAGGCCGTTG 268760 || ||||| ||||| || || |||| |||||| ||| |||||||| | || | | Sbjct 1149747 TTCGTGATCTTTCCCATTCA--ATGGCCTGATATTTGGCACATGTACAAGAAAGCTGAGG 1149690 Query 268761 CTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAATT 268820 |||| |||||||| || ||||||||||| | || | || | |||||| ||| | Sbjct 1149689 CTTCATTTTGGACGGTCGAAGAAGTAGACTTATCAAAGGATATGCACGATTGGGCAAAGT 1149630 Query 268821 TAAA--ACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGA 268878 | || || | ||||| | ||||| ||| || | | || || ||||| | ||| Sbjct 1149629 TGAATGACAACGAGAAACA--TTTTATTTCTCATGTATTAGCATTCTTTGCTGCCTCTGA 1149572 Query 268879 TGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGC 268938 ||| || || || |||||||| || ||| ||| | || || || || | |||| || Sbjct 1149571 TGGCATTGTCAATGAAAATCTCGTTGAGCGATTCAGCCAGGAAGTTCAAGTCACTGAGGC 1149512 Query 268939 CAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCT 268998 | || || || || ||||| |||| || |||||| | || ||||| ||||| || Sbjct 1149511 TCGCTGCTTCTATGGCTTCCAAGTAGCCATGGAAAATGTGCACTCAGAAATGTATTCACT 1149452 Query 268999 ATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTC--TTCTATG 269056 | || ||||| || || |||| || | | || | ||| | ||| | | || Sbjct 1149451 TCTTATTGATACCTACATTACTGAT-CCATCTCAGAGGGACTACT-TGTTCAATGCAATT 1149394 Query 269057 AGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGAT-AG 269115 |||| | ||||| | || ||| || | |||||| |||| ||||| | || || Sbjct 1149393 GAAACTCTACCTTGTGTTACCAAGAAAGCTAACTGGGCTATGAACTGGATCAGTCATAAG 1149334 Query 269116 CGCGC----CTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTT 269171 | || || | ||| | |||| | |||||||| ||||| ||||| || ||||| Sbjct 1149333 AGTGCTACATTTGCTGAGCGA-GTTA-TAGCTTTTGCAGCTGTTGAAGGAATTTTCTTCA 1149276 Query 269172 CGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTT 269231 || |||||| || || |||||||||||||| |||| | ||||||||| | |||| Sbjct 1149275 GTGGTAGTTTTGCTGCCATATTTTGGTTGAAGAAGCGAGGTTTAATGCCAGGACTTACTT 1149216 Query 269232 TC 269233 || Sbjct 1149215 TC 1149214 >seq256 Length=3517054 Score = 131 bits (144), Expect = 4e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| |||| ||| | |||||||| ||||||||||| || || || | || | || || Sbjct 130799 AAGGACTAAATGAAGGGTAGATTCCTTCTGAATATTGTAATCGGACAATGTACGTCCATC 130858 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| | ||||||||| || || || | || || || || ||||| |||||||| ||||| Sbjct 130859 TTCCAATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTATC 130918 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 || || || || || |||||||| | | | || | || ||||| || || || || Sbjct 130919 TTGGATTTTGGCCTTGACATTTTCAATGCTGTCAGCCGCATCAACCTCAAGGGTGATGGT 130978 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || || || |||||||| ||||| || ||||||||| Sbjct 130979 TTTTCCTGTGAGTGTTTTCACAAAGATTTGCATTTTG 131015 >seq222 Length=7060343 Score = 129 bits (142), Expect = 1e-24 Identities = 146/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 ||||||| ||||| || || || || | ||| ||||| | |||||| || ||||| | Sbjct 1553859 CTTTCTGGATATTGTAATCTTGAAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAGA 1553918 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | | || || ||||| ||||| ||||||||||||||||| || || || || ||||||| Sbjct 1553919 TCAATCTTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGGATTTTAGCCTTGACATTTT 1553978 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 | | || || | || ||||| | || || ||||||||||| | ||||| |||| Sbjct 1553979 CAATAGTGTCAGAGGCCTCAACCTCCAAGGTGATGGTCTTACCAGTCAAAGTTTTAACAA 1554038 Query 104550 ATATCTGCATTTTGTG 104565 | |||||||| ||||| Sbjct 1554039 AAATCTGCATATTGTG 1554054 >seq1 Length=8792355 Score = 102 bits (112), Expect = 2e-16 Identities = 98/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 104334 CCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATA 104393 |||||| | || ||| || || || | || |||||||||||||| |||||||| || | Sbjct 1064698 CCCCTC--AACCGAAGGACAAGGTGAAGGGTTGATTCTTTCTGAATGTTATAGTCTGAAA 1064641 Query 104394 GAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTA 104453 | || | || ||||| ||||||||||||||||| |||| || || ||||| ||||| | Sbjct 1064640 GTGTGCGTCCATCTTCGAGTTGTTTTCCAGCAAAGATTAATCTTTGCTGATCTGGAGGAA 1064581 Query 104454 TTCCT 104458 ||||| Sbjct 1064580 TTCCT 1064576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151393133431756