Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq89 102 7e-17 >seq89 Length=3244750 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCC 48574 || |||||||| ||||| |||||||||||| ||||| || | ||| || |||| Sbjct 1691453 AATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGACAAAGTGCGACCGTCT 1691512 Query 48575 TCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCC 48634 || ||||| || ||| || |||| | |||||| ||||| || | | ||| ||||| Sbjct 1691513 TCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGAATTCCTTCTTTGTCT 1691572 Query 48635 ATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG-TCTCGACTGTTATGGT 48693 |||||| ||| | | || || |||| || || || ||| | ||| ||||| Sbjct 1691573 TGAATTTTGGCCTTCACGTTTTCAATTGTGTCGG-AGGCTTCGACCTCAAGTGTGATGGT 1691631 Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||||| || |||||||| |||||||| ||||| Sbjct 1691632 TTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || |||| | | ||| ||||| || || |||||| |||||||| ||||| | Sbjct 1690525 ACCACCACGCAGACGCAGCACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAATCTGA 1690584 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | | || | ||||||| ||||||||| | |||||| |||||| || || || Sbjct 1690585 GAGTGTACGTCCATCCTCCAACTGCTTACCAGCAAAAATTAGACGCTGTTGGTCTGGAGG 1690644 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | || |||||||||| ||||| || | | | | |||||||| | || || Sbjct 1690645 GATACCTTCCTTGTCCTGGATTTTGGCTTTCACATTCTCAATGGTATCAGAAGCTTCAAC 1690704 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || ||||| ||||| || ||||| || |||||||||||||| Sbjct 1690705 CTCCAAAGTGATGGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 1690752 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48514 TAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTC 48573 ||| ||||| |||||||| ||| ||||| || ||||| || | | || | || Sbjct 1689606 TAATACTAAGTGAAGTGTAGACTCTTTTTGGATATTGTAGTCTGATAGAGTACGACCATC 1689665 Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633 ||| || ||||| || | |||| ||||||||||| || || | || ||||||||| Sbjct 1689666 CTCAAGTTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAGGGATACCTTCCTTGTC 1689725 Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693 | || || || | | | | |||||||| | || || ||| | ||| ||||| Sbjct 1689726 CTGGATCTTGGCTTTTACATTCTCAATGGTATCAGAAGCTTCAACCTCCAATGTGATGGT 1689785 Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || ||||| || |||||||||||||| Sbjct 1689786 CTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 1689818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421249367162357