Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq256 197 8e-46 >seq256 Length=3517054 Score = 197 bits (218), Expect = 8e-46 Identities = 470/698 (67%), Gaps = 28/698 (4%) Strand=Plus/Plus Query 3449 AAATCTATCTTCGACAATATCGATaaaaaaaaaTTATGTGACGCCAGGGCAAGATCCAAC 3508 |||||| || |||| | |||||||| || | | || ||||| | ||| || Sbjct 2199431 AAATCTGCATTTGACAGGCTGGATAAAAATGAAATGAGAGAAGCCAGAACTAGAAGTAAT 2199490 Query 3509 CCATTCGAATTAGTGGGCAAAGCtttttttATCAACAGAGGTGCTGTAAAAATGGCAAAC 3568 || | ||| | | | ||| || | ||| | || |||| ||||||||||||||| || Sbjct 2199491 CCCTATGAAACAATTAGAAAATCTATATTTTTAAATAGAGCTGCTGTAAAAATGGCTAAT 2199550 Query 3569 ATTGATCATGCAACGAATTTCGTATTTACACGATTGAATGATGGATCAAATGAATTGATA 3628 || ||| | || ||||| | ||||| ||| || | | ||||| | | Sbjct 2199551 ATCGATAAGGCTTGTGATTTCATGTTTACTAAATTTAAATTACCACCTGATGAACCGTTG 2199610 Query 3629 TATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATG--TTAT-GGAGA 3685 || |||||||| ||||| ||||||||||| || || || |||||| | |||| ||||| Sbjct 2199611 TACTTTGCTGATGTATGTGCTGGTCCAGGAGGATTTAGCGAATATGTACTTTATAGGAGA 2199670 Query 3686 AAGAAATGGAATATCAAAGGTTATGGTATGACGTTACGC-Gaaaaa----aaTGATTTTC 3740 ||| ||| |||||| | ||| || |||| | |||||| ||||||||| Sbjct 2199671 AAG---TGGCGCGCCAAAGGATTTGG-AT----TTACACTGAAAAATGAAAATGATTTTA 2199722 Query 3741 AACTGAACAGATTTT-ACGAT--AACTTTTCGGAAACTTTACACCCGTATTATGGTCCGC 3797 || || | ||||| | | | | | | |||||||| || || |||||||| || Sbjct 2199723 AATTGCAT-GATTTCCATGCTGGACCAAGT--GAAACTTTTCATCCTTATTATGGACCAA 2199779 Query 3798 TTAACGATGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTTGTGAAATGATTATGA 3857 | ||||| || | || || || ||||||| | | |||| | |||| | || Sbjct 2199780 AAGATAATGGTGATGTGTATGATCCAGAAAATCAAACTGCTTTT---GCAATGTTAAT-- 2199834 Query 3858 AAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGG 3917 ||||| || || || ||||| ||||||||||| || || || || || |||| Sbjct 2199835 -AGATAAACAAACTTCTGGGGTTCATTTCATGATGGCTGATGGAGGATTTTCTGTGGAGG 2199893 Query 3918 GTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTG 3977 | ||||||||||| |||||| | ||||| ||| | |||| || |||||||| ||| | | Sbjct 2199894 GACAAGAAAATATCCAAGAAGTTTTATCCAAACAATTGTACTTATGTCAATGCTTAGTAG 2199953 Query 3978 CATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACAC 4037 | || |||| | || || || || | ||| | ||| | || ||| ||||||| | Sbjct 2199954 CTTTAATGACAGTTAGACCGGGAGGACACTTTGTGACAAAAGTGTTTGATTTATTTACTC 2200013 Query 4038 CTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCA 4097 | |||||||| || | | ||| | ||||| |||| |||||| |||| || |||| Sbjct 2200014 CATTTAGTGCAGGACTTATTTATATCATGTACAGATGTTTTAAGAAAATTTCAATATTCA 2200073 Query 4098 AACCACATTCATCGCGACCGGCCAATTCTGAAAGATAT 4135 | ||| || | || |||| || || |||||||||||| Sbjct 2200074 AGCCAAATACTTCAAGACCCGCTAACTCTGAAAGATAT 2200111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276552396732571