Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq223 109 3e-19 seq294 95.1 6e-15 seq291 91.5 8e-14 seq222 87.8 9e-13 seq267 82.4 4e-11 >seq223 Length=1090667 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1013396 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1013455 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 1013456 TGAGCTAATGGGCC 1013469 >seq294 Length=1606569 Score = 95.1 bits (104), Expect = 6e-15 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 |||| |||||||| | || |||||||||| |||||||||||||||||||||||||| Sbjct 271561 AAAAGTAAATTGGCTCCAGAGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGC 271502 Query 11506 TCTRACCAACTGAGCTAATGGGCCGTCGA 11534 ||| |||| |||||||| | ||||| || Sbjct 271501 TCTAACCAGCTGAGCTATGGAGCCGTTGA 271473 >seq291 Length=3692699 Score = 91.5 bits (100), Expect = 8e-14 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 |||| ||||| |||||||| | || |||||||||| || |||||||||||||||| Sbjct 2861858 TTAAAGAAAAAAAAAATTGGCTCCAGAGGGGATCGAACCCACGGCCTTCGCGTTATTAGC 2861799 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||| |||| |||||||| | |||| Sbjct 2861798 ACGACGCTCTAACCAGCTGAGCTATGGAGCCG 2861767 Score = 89.7 bits (98), Expect = 3e-13 Identities = 74/90 (82%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| ||||||| | || |||||||||| || |||||||||||||||||||||| Sbjct 2861699 AAAAAT--AATTGGCTCCAGAGGGGATCGAACCCACGGCCTTCGCGTTATTAGCACGACG 2861642 Query 11505 CTCTRACCAACTGAGCTAATGGGCCGTCGA 11534 |||| |||| |||||||| | |||| ||| Sbjct 2861641 CTCTAACCAGCTGAGCTATGGAGCCGCCGA 2861612 >seq222 Length=7060343 Score = 87.8 bits (96), Expect = 9e-13 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||| | || ||||| | || |||||||||| || |||||||||||||||||||||| Sbjct 331629 AAAAGTAAATTTGGCTCCAGAGGGGATCGAACCCACGGCCTTCGCGTTATTAGCACGACG 331570 Query 11505 CTCTRACCAACTGAGCTAATGGGCCGT 11531 |||| |||| |||||||| | ||||| Sbjct 331569 CTCTAACCAGCTGAGCTATGGAGCCGT 331543 Score = 87.8 bits (96), Expect = 9e-13 Identities = 72/87 (83%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 11444 AAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||| |||| |||| | || |||||||||| || |||||||||||||||||||| Sbjct 331794 AAAAAAGTAAATGTGGCTCCAGAGGGGATCGAACCCACGGCCTTCGCGTTATTAGCACGA 331735 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||| |||||||| ||||| Sbjct 331734 CGCTCTAACCAGCTGAGCTATGGGGCC 331708 >seq267 Length=3706225 Score = 82.4 bits (90), Expect = 4e-11 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| || |||||||||||||||||||||||||| |||| |||||||| | | Sbjct 1808083 GGATCGAACCCACGGCCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTATGGAG 1808142 Query 11528 CCGT 11531 |||| Sbjct 1808143 CCGT 1808146 Score = 82.4 bits (90), Expect = 4e-11 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| || |||||||||||||||||||||||||| |||| |||||||| | | Sbjct 1808617 GGATCGAACCCACGGCCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTATGGAG 1808676 Query 11528 CCGTCGA 11534 ||| ||| Sbjct 1808677 CCGCCGA 1808683 Score = 82.4 bits (90), Expect = 4e-11 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| || |||||||||||||||||||||||||| |||| |||||||| | | Sbjct 1809070 GGATCGAACCCACGGCCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTATGGAG 1809011 Query 11528 CCGT 11531 |||| Sbjct 1809010 CCGT 1809007 Lambda K H 0.639 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261490062268132