Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq256 131 2e-25 seq89 131 2e-25 seq222 123 2e-23 seq336 114 1e-20 seq123 96.9 3e-15 seq1 82.4 7e-11 >seq256 Length=3517054 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 ||||||||||| || | || |||||| || || ||| |||| ||||||||| Sbjct 130815 GTAGATTCCTTCTGAATATTGTAATCGGACAATGTACGTCCATCTTCCAATTGTTTTCCG 130874 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| ||||||||||| ||||||||||| ||||| || || | ||||| |||||| Sbjct 130875 GCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTG 130934 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | | ||||||| || || |||| |||||||||||||| || || ||| Sbjct 130935 ACATTTTCAATGCTGTCAGCCGCATCAACCTCAAGGGTGATGGTTTTTCCTGTGAGTGTT 130994 Query 94991 TTCACAAAGATCTGCAT 95007 ||||||||||| ||||| Sbjct 130995 TTCACAAAGATTTGCAT 131011 >seq89 Length=3244750 Score = 131 bits (144), Expect = 2e-25 Identities = 170/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || |||||||||| | || | ||| | || |||||||| || | ||||| Sbjct 1691886 TTTGCATACCACCTCTCAATCTGAGTACAAGGTGGAGTGTGGATTCCTTCTGAATGTTAT 1691945 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 |||| || ||| ||| || ||||| ||||| ||||||| ||||| ||||| | Sbjct 1691946 AATCAGACAAGGTGCGTCCATCTTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGT 1692005 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 |||| || || || |||||||| | ||| |||||||| || | | ||||| | Sbjct 1692006 CTGGGGGGATGCCCTCTTTGTCTTGAATCTTTGCCTTAACATTTTCAATGGTGTCGGATG 1692065 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || | ||||||||||| ||||| || || ||||||||||||||||| Sbjct 1692066 CCTCGACCTCCAATGTGATGGTTTTACCAGTCAGCGTCTTCACAAAGATCTGCAT 1692120 Score = 127 bits (140), Expect = 2e-24 Identities = 169/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || |||||||| | ||||| || || |||| || || |||||||| | || | Sbjct 1691430 TTTGCATGCCTCCTCTAAGACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGT 1691489 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | || || |||| || || |||||||||||| | || || | | || |||| Sbjct 1691490 AGTCTGACAAAGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGAT 1691549 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 |||| ||||| ||||||||||| | |||||| ||||| ||| | | ||||| | | Sbjct 1691550 CTGGGGGAATTCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGG 1691609 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| |||| ||||||||||| || || |||||||| ||||| || ||||| Sbjct 1691610 CTTCGACCTCAAGTGTGATGGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 122 bits (134), Expect = 8e-23 Identities = 171/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||||||||||||| | || | |||| || ||||| || || | Sbjct 1691653 AAAAATTTGCATACCTCCTCTCAATCTGAGTACAAGATGCAGTGTGGATTCTTTCTGAAT 1691712 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| ||||| || |||| ||| |||| |||||||| ||||||| ||||| || Sbjct 1691713 GTTGTAATCTGACAGAGTGCGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTG 1691772 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||||||||| ||||| || || || || | |||||| ||||| || | | ||| || Sbjct 1691773 CTGATCTGGTGGAATTCCCTCCTTATCTTGAATTTTGGCCTTAACATTCTCAATAGTATC 1691832 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || |||| || ||||| || ||||| ||||| || |||||||| ||||| Sbjct 1691833 TGAAGACTCAACCTCAAGGGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 1691892 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||||||| | ||| || ||||| || | ||| || || || ||| | Sbjct 1689832 CGCAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGACAGTGTGCGTCCA 1689891 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || ||||||||||| || ||||||| | | ||||||||||||||||| ||||||||| Sbjct 1689892 TCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCTTTG 1689951 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || |||||||| | | |||||| | || || || | |||||| Sbjct 1689952 TCTTGAATCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCACTTCCAAGGTGATG 1690011 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || | || || |||||||||||||| Sbjct 1690012 GTCTTTCCTGTCAATGTCTTGACAAAGATCTGCAT 1690046 Score = 116 bits (128), Expect = 3e-21 Identities = 157/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 |||| |||||||| | ||| || || ||||| | ||||||||| | | | ||| || Sbjct 1690994 CGCAGAACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATC--TGACAATGTGCGAC 1691051 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||| |||| ||||| || |||| ||||| | ||||| |||||||| || ||||||| Sbjct 1691052 CATCTTCCAATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGGGATGCCTTCTT 1691111 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | |||||| || || || | | ||||||| ||||| |||| || | Sbjct 1691112 TGTCCTGAATTTTAGCTTTCACATTTTCAATTGTGTCAGATGCTTCGACTTCAAGAGTTA 1691171 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||||||||| || || || ||||| || ||||| Sbjct 1691172 TAGTTTTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 1691208 Score = 107 bits (118), Expect = 2e-18 Identities = 169/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||| || | || || | |||||||| | || || || ||||| | Sbjct 1691197 AAAAATTTGCATTCCACCACGCAGACGGAGTACCAAGTGGAGGGTGGACTCTTTTTGAAT 1691256 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||||| || || ||| ||| |||| ||| || || |||| ||||| | || Sbjct 1691257 ATTATAGTCCGACAATGTGCGACCATCTTCCAACTGCTTACCAGCAAAAATTAAACGCTG 1691316 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||||||||| || || ||||||||||| | || || |||||||| | | ||||| Sbjct 1691317 CTGATCTGGTGGGATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTC 1691376 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | ||||| || | || |||||||| ||||| | ||||| |||||||| ||||| Sbjct 1691377 TGAGGCCTCGACTTCCAAAGTAATGGTTTTACCAGTCAATGTTTTAACAAAGATTTGCAT 1691436 Query 95008 GC 95009 || Sbjct 1691437 GC 1691438 Score = 102 bits (112), Expect = 7e-17 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 |||| |||||| || | || || ||||| || | ||||||||| | | ||||| | Sbjct 1690538 CGCAGCACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAATC--TGAGAGTGTACGTC 1690595 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 |||||||| ||| || || |||| |||| | || || |||||||| |||||||| | Sbjct 1690596 CATCCTCCAACTGCTTACCAGCAAAAATTAGACGCTGTTGGTCTGGAGGGATACCTTCCT 1690655 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | ||||| || || || | | || |||| || || || | |||| Sbjct 1690656 TGTCCTGGATTTTGGCTTTCACATTCTCAATGGTATCAGAAGCTTCAACCTCCAAAGTGA 1690715 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || ||||||||||| || ||||| |||||||| Sbjct 1690716 TGGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 1690752 Score = 91.5 bits (100), Expect = 1e-13 Identities = 164/238 (69%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 94772 TTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTA 94831 |||||| ||| || | | || || || ||||| | ||||| || ||||| | || Sbjct 1689583 TTTTACTGTCCACCCCGGAGACGTAATACTAAGTGAAGTGTAGACTCTTTTTGGATATTG 1689642 Query 94832 TAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCT 94889 || || | |||| || || |||||| || || || || |||| || || | |||| Sbjct 1689643 TAGTC--TGATAGAGTACGACCATCCTCAAGTTGCTTGCCAGCAAAAATCAAACGCTGCT 1689700 Query 94890 GATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAG 94949 | |||||||| |||||||| ||||| | || || || || || | | || |||| Sbjct 1689701 GGTCTGGAGGGATACCTTCCTTGTCCTGGATCTTGGCTTTTACATTCTCAATGGTATCAG 1689760 Query 94950 CGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | |||||||| || ||||||||||| || ||||| |||||||| Sbjct 1689761 AAGCTTCAACCTCCAATGTGATGGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 1689818 >seq222 Length=7060343 Score = 123 bits (136), Expect = 2e-23 Identities = 121/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||| ||||| ||| ||||||| |||||||||||||||||||| || |||||||| Sbjct 1553893 ATCTTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGATCTGGAGGGATTCCTTCTTT 1553952 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | ||||| |||||||| | | |||||||| | || || || | ||||| Sbjct 1553953 ATCCTGGATTTTAGCCTTGACATTTTCAATAGTGTCAGAGGCCTCAACCTCCAAGGTGAT 1554012 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || ||||| | |||||| ||||| |||||||| Sbjct 1554013 GGTCTTACCAGTCAAAGTTTTAACAAAAATCTGCAT 1554048 >seq336 Length=3726090 Score = 114 bits (126), Expect = 1e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 94862 TGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATT 94921 |||||||| ||||||| |||||||||||||| |||||||| ||||| || || | ||| Sbjct 1528424 TGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATT 1528483 Query 94922 TTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCA 94981 || |||||||| | | ||| |||| | ||||| || | || || ||||| ||| Sbjct 1528484 TTGGCCTTGACATTTTCAATAGTATCAGAGGCTTCGACCTCCAAGGTAATAGTTTTACCA 1528543 Query 94982 GTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||| |||||||||||||| Sbjct 1528544 GTCAAAGTTTTGACAAAGATCTGCAT 1528569 >seq123 Length=3260300 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||| ||||| || | ||||| || || ||||||||||||||||| || ||||| Sbjct 712159 ATCTTCCAATTGTTTACCAGCGAAGATCAACCTCTGCTGATCTGGAGGAATTCCCTCTTT 712218 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||||| || ||||| | | ||| |||| || || || | || || Sbjct 712219 GTCTTGGATTTTAGCTTTGACATTTTCAATAGTATCAGAAGCTTCAACTTCCAAAGTAAT 712278 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || ||||| | |||||| |||||||||||||| Sbjct 712279 GGTCTTGCCAGTTAAAGTTTTGACAAAGATCTGCAT 712314 >seq1 Length=8792355 Score = 82.4 bits (90), Expect = 7e-11 Identities = 96/128 (75%), Gaps = 4/128 (3%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || ||||| || | || | ||| | || ||||| || || | |||||| || | Sbjct 1064701 CCACCCCTCAACCGAAGGACAAGGTGAAGGGTTGATTCTTTCTGAATGTTATAGTC--TG 1064644 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | ||||| | ||| || || |||||||| ||||||||||||||||||||||||||| Sbjct 1064643 AAAGTGTGCGTCCATCTTCGAGTTGTTTTCCAGCAAAGATTAATCTTTGCTGATCTGGAG 1064584 Query 94899 GAATACCT 94906 |||| ||| Sbjct 1064583 GAATTCCT 1064576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289199500520