Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq347 228 1e-55 seq234 212 1e-50 seq156 208 1e-49 seq357 176 7e-40 >seq347 Length=8643572 Score = 228 bits (252), Expect = 1e-55 Identities = 213/271 (79%), Gaps = 0/271 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||| | | |||||| |||||||||||||| || ||||||||||| ||| Sbjct 2649864 GCCAAGCGTCATCGTAAAGTTCTTCGTGATAACATCCAAGGTATTACCAAGCCAGCAATC 2649923 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| |||||||||||||| ||||||||| |||| || ||| |||| || || | | Sbjct 2649924 CGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCAGGCTTGATCTACGAGGAAACT 2649983 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| |||| | ||| | |||||| ||| ||| || | ||| ||| || ||| || ||| Sbjct 2649984 CGTGGTGTTCTCAAGGTATTCCTCGAGAACGTCATTCGTGACGCTGTCACCTACACTGAG 2650043 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| ||||| ||||||| | ||||| ||| | || ||||||||| Sbjct 2650044 CACGCCAAGCGCAAGACCGTCACTGCCATGGACGTAGTCTACGCACTCAAGCGTCAAGGC 2650103 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 || | | || ||||| || ||||| ||| Sbjct 2650104 CGCACTCTATACGGTTTCGGCGGTTAAACTT 2650134 Score = 226 bits (250), Expect = 4e-55 Identities = 206/260 (79%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||||||||| | | |||||| |||||||||||||| || ||||||||||| ||| Sbjct 2636328 GCTAAGCGTCATCGTAAAGTTCTTCGTGATAACATCCAAGGTATTACCAAGCCAGCAATC 2636269 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| |||||||||||||| ||||||||| |||| || ||| |||| || || | | Sbjct 2636268 CGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCAGGCTTGATCTACGAGGAAACT 2636209 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| |||| | ||| | |||||| ||| ||| || | ||| ||| || ||| || ||| Sbjct 2636208 CGTGGTGTTCTCAAGGTATTCCTCGAGAACGTCATTCGTGACGCTGTCACCTACACTGAG 2636149 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| ||||| |||||||| | || || ||| | || ||||||||| Sbjct 2636148 CACGCCAAGCGCAAGACCGTCACTGCCATGGATGTAGTTTACGCACTCAAGCGTCAAGGC 2636089 Query 16673 CGTAAGATTTATGGTTTTGG 16692 || | | || ||||| || Sbjct 2636088 CGCACTCTATACGGTTTCGG 2636069 Score = 224 bits (248), Expect = 2e-54 Identities = 210/267 (79%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||| ||||||| | |||||| |||||||||||||| ||||| |||||||| ||| Sbjct 1823303 GCTAAGCGCCATCGCAAAGTTCTTCGTGATAACATCCAAGGTATCACTAAGCCAGCAATC 1823244 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| ||||| |||||||| ||||||||| |||| ||| | | || ||||||| Sbjct 1823243 CGTCGTCTTGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGGACTTATTTACGAAGAGACC 1823184 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| |||| | ||| | ||| | ||| || |||| ||| ||| || || |||||| Sbjct 1823183 CGTGGTGTTCTCAAGGTTTTCTTGGAGAATGTCATCCGTGACGCTGTCACTTACACCGAG 1823124 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || |||||||||||| ||||||| | ||||| ||| | || ||||||||| Sbjct 1823123 CACGCCAAGCGCAAGACTGTCACCGCCATGGACGTAGTCTACGCACTCAAGCGTCAAGGC 1823064 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | || ||||| ||| ||||| Sbjct 1823063 CGCACTCTCTACGGTTTCGGAGGTTAA 1823037 Score = 224 bits (248), Expect = 2e-54 Identities = 210/267 (79%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||||| | |||||| |||||||||||||| ||||| |||||||| ||| Sbjct 2062496 GCAAAGCGCCATCGCAAAGTTCTTCGTGATAACATCCAAGGTATCACGAAGCCAGCAATC 2062555 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| |||||||||||||| ||||||||| |||| ||| | | || ||||||| Sbjct 2062556 CGTCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGGACTTATTTACGAAGAGACC 2062615 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| |||| | ||| | ||||| ||| || |||| ||| ||| || || |||||| Sbjct 2062616 CGTGGTGTTCTCAAGGTTTTCCTGGAGAATGTCATCCGTGACGCTGTCACTTACACCGAG 2062675 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| ||||| ||||| |||||| ||||||| | ||||| ||| | || ||||||||| Sbjct 2062676 CACGCCAAACGCAAGACAGTCACCGCCATGGACGTAGTCTACGCACTCAAGCGTCAAGGC 2062735 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | || ||||| || ||||| Sbjct 2062736 CGCACTCTCTACGGTTTCGGCGGTTAA 2062762 Score = 206 bits (228), Expect = 4e-49 Identities = 206/267 (77%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||| | | |||||| || ||||||||||| ||||| ||||| || ||| Sbjct 2095292 GCCAAGCGTCATCGTAAAGTTCTTCGTGACAACATCCAAGGTATCACGAAGCCTGCCATC 2095233 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| |||||||||||||| || |||||| |||| || ||| |||| || || | | Sbjct 2095232 CGTCGTCTCGCTCGTCGTGGTGGTGTTAAGCGTATCTCAGGCTTGATCTACGAGGAAACT 2095173 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| |||| | |||||| | | ||| |||| ||| ||| || ||| ||||| Sbjct 2095172 CGTGGAGTTCTGAAAGTATTCCTCGAAAACGTCATCCGTGACGCTGTCACCTACACCGAA 2095113 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| ||||| | ||||| | ||||| |||||||| | ||||| Sbjct 2095112 CACGCCAAGCGCAAGACCGTCACTGCTATGGACGTAGTCTACGCATTGAAGAGACAAGGT 2095053 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | || ||||| ||| ||||| Sbjct 2095052 CGTACTCTCTACGGTTTCGGAGGTTAA 2095026 Score = 181 bits (200), Expect = 2e-41 Identities = 186/243 (77%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| |||||||| |||||||| || || ||||| |||||||| ||||| Sbjct 1448215 CGTGATAACATCCAGGGAATCACGAAGCCAGCAATTCGCCGTCTCGCTCGTCGAGGTGGT 1448156 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| | ||||| ||| |||| ||||||| ||||| ||| | ||| ||||||| Sbjct 1448155 GTCAAGCGTATTTCTGGCTTGATCTACGAAGAGACTCGTGGTGTCCTCAAGGTCTTCCTT 1448096 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| |||||| || ||| ||||| ||||| || || || || ||||| Sbjct 1448095 GAGAACGTCATCCGTGATGCCGTCACCTACACCGAACACGCCAAGCGCAAAACCGTCACT 1448036 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 | ||||| | |||||||| | || | ||||| || | | || ||||| ||| || Sbjct 1448035 GCTATGGACGTTGTCTATGCTCTTAAGAGACAAGGTCGCACCCTCTACGGTTTCGGAGGT 1447976 Query 16697 TAA 16699 ||| Sbjct 1447975 TAA 1447973 >seq234 Length=2749388 Score = 212 bits (234), Expect = 1e-50 Identities = 195/247 (79%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || ||||||||||| |||||||||||||| || ||||| ||||||||||||||||| Sbjct 920473 TCTGCGTGATAACATCCAGGGAATCACCAAGCCTGCCATCCGCCGTCTGGCTCGTCGTGG 920532 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 |||||||||||| |||| ||| || |||| || |||| ||||| ||| | ||| |||| Sbjct 920533 CGGAGTCAAGCGTATCTCCGGACTGATCTACGAGGAGACTCGTGGTGTACTCAAGGTCTT 920592 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 |||| ||| |||||||| ||| ||| || || ||||||||||| || || ||||| || Sbjct 920593 CCTCGAGAACGTTATCCGTGACGCTGTCACTTACACCGAGCACGCCAAGCGCAAGACCGT 920652 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 |||| ||||||| | ||||| ||| | || | || ||||| | | || ||||| || Sbjct 920653 CACCGCCATGGACGTAGTCTACGCACTCAAGAGACAGGGCCGCACCTTGTACGGTTTCGG 920712 Query 16693 AAGTTAA 16699 ||||| Sbjct 920713 CGGTTAA 920719 >seq156 Length=5073579 Score = 208 bits (230), Expect = 1e-49 Identities = 196/250 (78%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || |||||||||||||||||||||||||| || ||||| ||||||||||||||||| Sbjct 3476759 TCTGCGTGATAACATCCAAGGAATCACCAAGCCTGCCATCCGCCGTCTGGCTCGTCGTGG 3476700 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||||||||||| |||| || ||| |||| ||||||| ||||| ||| | ||| |||| Sbjct 3476699 CGGAGTCAAGCGAATCTCCGGCTTGATCTACGAAGAGACTCGTGGTGTCCTCAAGGTCTT 3476640 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 |||| | | ||| |||| ||| ||| || || ||||||||||| || || ||||| || Sbjct 3476639 CCTCGAAAACGTCATCCGTGACGCTGTCACTTACACCGAGCACGCCAAGCGCAAGACAGT 3476580 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||| ||||||| | || || || |||| || |||||||| | |||| || || || Sbjct 3476579 CACAGCCATGGACGTAGTATACGCTCTGAAGCGACAAGGCCGCACTCTTTACGGATTCGG 3476520 Query 16693 AAGTTAATCT 16702 ||||| || Sbjct 3476519 CGGTTAAACT 3476510 >seq357 Length=700091 Score = 176 bits (194), Expect = 7e-40 Identities = 189/250 (76%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| |||||||||||||| || ||||| |||||||| |||||||| ||| Sbjct 537316 CGTGATAACATCCAGGGAATCACCAAGCCTGCCATCCGCCGTCTGGCCCGTCGTGGCGGA 537257 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| | ||||| ||| |||| ||||||| ||||| ||| | ||| ||||||| Sbjct 537256 GTCAAGCGTATTTCTGGCTTGATCTACGAAGAGACTCGTGGTGTACTCAAGGTCTTCCTT 537197 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| || || || |||||||| || || || ||||| ||||| Sbjct 537196 GAGAACGTCATCCGTGACGCCGTCACTTACACCGAGCATGCCAAGCGCAAGACGGTCACA 537137 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 ||||||| | || || || | || | || ||||| | | || ||||| || | Sbjct 537136 GCCATGGACGTAGTATACGCTCTCAAGAGGCAGGGCCGCACCTTGTACGGTTTCGGCGGC 537077 Query 16697 TAATCTTCTA 16706 ||| | |||| Sbjct 537076 TAAACATCTA 537067 Score = 176 bits (194), Expect = 7e-40 Identities = 189/250 (76%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| |||||||||||||| || ||||| |||||||| |||||||| ||| Sbjct 547540 CGTGATAACATCCAGGGAATCACCAAGCCTGCCATCCGCCGTCTGGCCCGTCGTGGCGGA 547481 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| | ||||| ||| |||| ||||||| ||||| ||| | ||| ||||||| Sbjct 547480 GTCAAGCGTATTTCTGGCTTGATCTACGAAGAGACTCGTGGTGTACTCAAGGTCTTCCTT 547421 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| || || || |||||||| || || || ||||| ||||| Sbjct 547420 GAGAACGTCATCCGTGACGCCGTCACTTACACCGAGCATGCCAAGCGCAAGACGGTCACA 547361 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 ||||||| | || || || | || | || ||||| | | || ||||| || | Sbjct 547360 GCCATGGACGTAGTATACGCTCTCAAGAGGCAGGGCCGCACCTTGTACGGTTTCGGCGGC 547301 Query 16697 TAATCTTCTA 16706 ||| | |||| Sbjct 547300 TAAACATCTA 547291 Score = 176 bits (194), Expect = 7e-40 Identities = 189/250 (76%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| |||||||||||||| || ||||| |||||||| |||||||| ||| Sbjct 624416 CGTGATAACATCCAGGGAATCACCAAGCCTGCCATCCGCCGTCTGGCCCGTCGTGGCGGA 624357 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| | ||||| ||| |||| ||||||| ||||| ||| | ||| ||||||| Sbjct 624356 GTCAAGCGTATTTCTGGCTTGATCTACGAAGAGACTCGTGGTGTACTCAAGGTCTTCCTT 624297 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| || || || |||||||| || || || ||||| ||||| Sbjct 624296 GAGAACGTCATCCGTGACGCCGTCACTTACACCGAGCATGCCAAGCGCAAGACGGTCACA 624237 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 ||||||| | || || || | || | || ||||| | | || ||||| || | Sbjct 624236 GCCATGGACGTAGTATACGCTCTCAAGAGGCAGGGCCGCACCTTGTACGGTTTCGGCGGC 624177 Query 16697 TAATCTTCTA 16706 ||| | |||| Sbjct 624176 TAAACATCTA 624167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074873592401