Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_006645.1 Length=21388 Score E Sequences producing significant alignments: (Bits) Value seq304 89.7 7e-14 seq314 82.4 1e-11 >seq304 Length=2969184 Score = 89.7 bits (98), Expect = 7e-14 Identities = 112/150 (75%), Gaps = 19/150 (13%) Strand=Plus/Minus Query 536 GTATACTATTTTTCTTGCTATGCGGTCGAAAGTACG-----TTAAAAAT-TGCGTTG-AA 588 ||||||||||||||||| | |||||||||||||| |||||| | |||| || Sbjct 2807847 GTATACTATTTTTCTTGATCCCCGGTCGAAAGTACGAGTGAACAAAAATGTTAGTTGAAA 2807788 Query 589 AATAA----------TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCT 638 ||| | | |||||| | ||| ||||||||||||||||||| |||||||| Sbjct 2807787 AATCAGAGCTTTGTTTCGATGCCCG-CCCTGACATTTGCGGCACGAGCGCAGCGAGTGTC 2807729 Query 639 GCTGGTCggggggggCAGGCATCAAATACA 668 ||||||| ||||||| |||||| || ||| Sbjct 2807728 GCTGGTC-AGGGGGGCGGGCATCGAAAACA 2807700 >seq314 Length=7483177 Score = 82.4 bits (90), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 1/70 (1%) Strand=Plus/Plus Query 594 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggg 653 ||||||| ||||| |||||| || ||||||||||||||||| |||||||||||||||| Sbjct 5352558 TTGATGCTCGCCCC-GACATTAGCATCACGAGCGAAGCGAGTGATGCTGGTCGGGGGGGG 5352616 Query 654 CAGGCATCAA 663 | ||||||| Sbjct 5352617 CGAGCATCAA 5352626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 68322917974641