Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_006651.1 Length=19161 Score E Sequences producing significant alignments: (Bits) Value seq251 91.5 2e-14 >seq251 Length=3450 Score = 91.5 bits (100), Expect = 2e-14 Identities = 179/259 (69%), Gaps = 32/259 (12%) Strand=Plus/Plus Query 3460 AAAAATAGTATATTACACTACAAGGGCAGAAAGTTGAGATTCCTGCACTGCGCGCCATGT 3519 |||| ||||||||| |||||||| | ||| |||| ||||| ||| | |||| | || Sbjct 1778 AAAATTAGTATATTTTCTTACAAGGGGATAAAATTGAATTTCCT-CAC-GTGCGCGAAGT 1835 Query 3520 ---GCCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGC 3576 ||||||||||||||||||||| ||| ||||| || |||| || | ||| | | Sbjct 1836 TAGGCCCGAGGCGAAGCCGAGGGCCTCACTTCACGCCCATCCGGGCATTCTATTTTATTC 1895 Query 3577 CCATGTAGTGTATACTATTTTTCTTGCTAT--GCGGTCGAAAGTA-CGTTA-AAAATTG- 3631 || |||| ||| ||||||||| |||| || |||||||| | | ||||| | Sbjct 1896 CCGTGTAAGAAATAATATTTTTCT--CTATCCTCGCGCGAAAGTATTGAGACAAAATAGT 1953 Query 3632 ---------CGTTaaaaaaaaaTT---------GATGCCTGCC--CCCGACATTTGCGGC 3671 | |||||||| |||| | ||||| ||| ||||||||||| Sbjct 1954 AATAAGACTCATTAAAAAATAATTTACATAAAAAAAAACTGCCCGCCCAACATTTGCGGC 2013 Query 3672 ACGAGCGAAGCGAGTGCTG 3690 ||||||| ||||||||||| Sbjct 2014 ACGAGCGTAGCGAGTGCTG 2032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 61196547391084