Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_006653.1 Length=26062 Score E Sequences producing significant alignments: (Bits) Value seq304 96.9 6e-16 seq314 82.4 1e-11 seq292 82.4 1e-11 seq56 82.4 1e-11 seq352 80.6 4e-11 seq325 80.6 4e-11 seq285 80.6 4e-11 seq67 80.6 4e-11 seq45 80.6 4e-11 seq1 80.6 4e-11 >seq304 Length=2969184 Score = 96.9 bits (106), Expect = 6e-16 Identities = 112/149 (75%), Gaps = 18/149 (12%) Strand=Plus/Plus Query 20580 TGTATTTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 20639 ||| || |||||| ||||||| ||||||| |||||||| ||||||||||||||||||| Sbjct 2807700 TGTTTTCGATGCCCGCCCCCCTGACCAGCGACACTCGCTGCGCTCGTGCCGCAAATGTCA 2807759 Query 20640 GGGGCAGGCATCAA----------TTATTTT-CAACGCA-ATTTTTAA-----CGTACTT 20682 ||| | |||||| | | ||||| |||| | |||||| ||||||| Sbjct 2807760 GGG-CGGGCATCGAAACAAAGCTCTGATTTTTCAACTAACATTTTTGTTCACTCGTACTT 2807818 Query 20683 TCGACCGCATAGCAAGAAAAATAGTATAC 20711 ||||||| | ||||||||||||||||| Sbjct 2807819 TCGACCGGGGATCAAGAAAAATAGTATAC 2807847 Score = 87.8 bits (96), Expect = 3e-13 Identities = 109/149 (73%), Gaps = 18/149 (12%) Strand=Plus/Minus Query 18732 GTATACTAGTTTTCTTACTATGCGGTCGAAAGTACG-----TTAAAAAT-TGCGTTGaaa 18785 |||||||| ||||||| | |||||||||||||| |||||| | ||||||| Sbjct 2807847 GTATACTATTTTTCTTGATCCCCGGTCGAAAGTACGAGTGAACAAAAATGTTAGTTGAAA 2807788 Query 18786 aa-----------aaTTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCT 18834 || | |||||| | ||| ||||||||||||||||||| |||||||| Sbjct 2807787 AATCAGAGCTTTGTTTCGATGCCCG-CCCTGACATTTGCGGCACGAGCGCAGCGAGTGTC 2807729 Query 18835 GCTGGTCgggggggCAGGCATCAAATACA 18863 ||||||| ||||||| |||||| || ||| Sbjct 2807728 GCTGGTCAGGGGGGCGGGCATCGAAAACA 2807700 >seq314 Length=7483177 Score = 82.4 bits (90), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 1/70 (1%) Strand=Plus/Minus Query 5220 TTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGG 5279 ||||||| ||||||||||||||||| ||||||||||||||||| || |||||| |||| Sbjct 5352626 TTGATGCTCGCCCCCCCCGACCAGCATCACTCGCTTCGCTCGTGATGCTAATGTC-GGGG 5352568 Query 5280 CAGGCATCAA 5289 | ||||||| Sbjct 5352567 CGAGCATCAA 5352558 >seq292 Length=3942572 Score = 82.4 bits (90), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 20580 TGTATTTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 20639 ||| || |||||| ||||||| ||||||| |||||||| ||||||||||||||||||| Sbjct 2611826 TGTTTTCGATGCCCGCCCCCCTGACCAGCGACACTCGCTGCGCTCGTGCCGCAAATGTC- 2611768 Query 20640 GGGGCAGGCATC 20651 |||| |||||| Sbjct 2611767 AGGGCGGGCATC 2611756 Score = 82.4 bits (90), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 18792 GATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggCAG 18851 |||||| |||| ||||||||||||||||||| |||||||| ||||||| ||||||| | Sbjct 2611756 GATGCCCGCCCT-GACATTTGCGGCACGAGCGCAGCGAGTGTCGCTGGTCAGGGGGGCGG 2611814 Query 18852 GCATCAAATACA 18863 ||||| || ||| Sbjct 2611815 GCATCGAAAACA 2611826 >seq56 Length=4197193 Score = 82.4 bits (90), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 18792 GATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggCAG 18851 |||||| |||| ||||||||||||||||||| |||||||| ||||||| ||||||| | Sbjct 3891312 GATGCCCGCCCT-GACATTTGCGGCACGAGCGCAGCGAGTGTCGCTGGTCAGGGGGGCGG 3891254 Query 18852 GCATCAAATACA 18863 ||||| || ||| Sbjct 3891253 GCATCGAAAACA 3891242 Score = 82.4 bits (90), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 20580 TGTATTTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 20639 ||| || |||||| ||||||| ||||||| |||||||| ||||||||||||||||||| Sbjct 3891242 TGTTTTCGATGCCCGCCCCCCTGACCAGCGACACTCGCTGCGCTCGTGCCGCAAATGTC- 3891300 Query 20640 GGGGCAGGCATC 20651 |||| |||||| Sbjct 3891301 AGGGCGGGCATC 3891312 >seq352 Length=389641 Score = 80.6 bits (88), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 20585 TTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGC 20644 ||||||| |||||||||||||||| ||||||||||||||||| || |||||| ||||| Sbjct 362668 TTGATGCTCGCCCCCCCGACCAGCATCACTCGCTTCGCTCGTGATGCTAATGTC-GGGGC 362610 Query 20645 AGGCATCAA 20653 ||||||| Sbjct 362609 GAGCATCAA 362601 Score = 80.6 bits (88), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 18790 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggC 18849 ||||||| ||||| |||||| || ||||||||||||||||| |||||||||||||||| Sbjct 362601 TTGATGCTCGCCCC-GACATTAGCATCACGAGCGAAGCGAGTGATGCTGGTCGGGGGGGC 362659 Query 18850 AGGCATCAA 18858 ||||||| Sbjct 362660 GAGCATCAA 362668 >seq325 Length=5113970 Score = 80.6 bits (88), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 18790 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggC 18849 ||||||| ||||| |||||| || ||||||||||||||||| |||||||||||||||| Sbjct 170083 TTGATGCTCGCCCC-GACATTAGCATCACGAGCGAAGCGAGTGATGCTGGTCGGGGGGGC 170025 Query 18850 AGGCATCAA 18858 ||||||| Sbjct 170024 GAGCATCAA 170016 Score = 80.6 bits (88), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 20585 TTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGC 20644 ||||||| |||||||||||||||| ||||||||||||||||| || |||||| ||||| Sbjct 170016 TTGATGCTCGCCCCCCCGACCAGCATCACTCGCTTCGCTCGTGATGCTAATGTC-GGGGC 170074 Query 20645 AGGCATCAA 20653 ||||||| Sbjct 170075 GAGCATCAA 170083 Score = 80.6 bits (88), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 18790 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggC 18849 ||||||| ||||| |||||| || ||||||||||||||||| |||||||||||||||| Sbjct 3277165 TTGATGCTCGCCCC-GACATTAGCATCACGAGCGAAGCGAGTGATGCTGGTCGGGGGGGC 3277107 Query 18850 AGGCATCAA 18858 ||||||| Sbjct 3277106 GAGCATCAA 3277098 Score = 80.6 bits (88), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 20585 TTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGC 20644 ||||||| |||||||||||||||| ||||||||||||||||| || |||||| ||||| Sbjct 3277098 TTGATGCTCGCCCCCCCGACCAGCATCACTCGCTTCGCTCGTGATGCTAATGTC-GGGGC 3277156 Query 20645 AGGCATCAA 20653 ||||||| Sbjct 3277157 GAGCATCAA 3277165 Score = 80.6 bits (88), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 20585 TTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGC 20644 ||||||| |||||||||||||||| ||||||||||||||||| || |||||| ||||| Sbjct 3939614 TTGATGCTCGCCCCCCCGACCAGCATCACTCGCTTCGCTCGTGATGCTAATGTC-GGGGC 3939556 Query 20645 AGGCATCAA 20653 ||||||| Sbjct 3939555 GAGCATCAA 3939547 Score = 80.6 bits (88), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 18790 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggC 18849 ||||||| ||||| |||||| || ||||||||||||||||| |||||||||||||||| Sbjct 3939547 TTGATGCTCGCCCC-GACATTAGCATCACGAGCGAAGCGAGTGATGCTGGTCGGGGGGGC 3939605 Query 18850 AGGCATCAA 18858 ||||||| Sbjct 3939606 GAGCATCAA 3939614 >seq285 Length=1439 Score = 80.6 bits (88), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 18790 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggC 18849 ||||||| ||||| |||||| || ||||||||||||||||| |||||||||||||||| Sbjct 162 TTGATGCTCGCCCC-GACATTAGCATCACGAGCGAAGCGAGTGATGCTGGTCGGGGGGGC 104 Query 18850 AGGCATCAA 18858 ||||||| Sbjct 103 GAGCATCAA 95 Score = 80.6 bits (88), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 20585 TTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGC 20644 ||||||| |||||||||||||||| ||||||||||||||||| || |||||| ||||| Sbjct 95 TTGATGCTCGCCCCCCCGACCAGCATCACTCGCTTCGCTCGTGATGCTAATGTC-GGGGC 153 Query 20645 AGGCATCAA 20653 ||||||| Sbjct 154 GAGCATCAA 162 >seq67 Length=4319778 Score = 80.6 bits (88), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 20585 TTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGC 20644 ||||||| |||||||||||||||| ||||||||||||||||| || |||||| ||||| Sbjct 1180182 TTGATGCTCGCCCCCCCGACCAGCATCACTCGCTTCGCTCGTGATGCTAATGTC-GGGGC 1180124 Query 20645 AGGCATCAA 20653 ||||||| Sbjct 1180123 GAGCATCAA 1180115 Score = 80.6 bits (88), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 18790 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggC 18849 ||||||| ||||| |||||| || ||||||||||||||||| |||||||||||||||| Sbjct 1180115 TTGATGCTCGCCCC-GACATTAGCATCACGAGCGAAGCGAGTGATGCTGGTCGGGGGGGC 1180173 Query 18850 AGGCATCAA 18858 ||||||| Sbjct 1180174 GAGCATCAA 1180182 >seq45 Length=4254430 Score = 80.6 bits (88), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 20585 TTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGC 20644 ||||||| |||||||||||||||| ||||||||||||||||| || |||||| ||||| Sbjct 28316 TTGATGCTCGCCCCCCCGACCAGCATCACTCGCTTCGCTCGTGATGCTAATGTC-GGGGC 28258 Query 20645 AGGCATCAA 20653 ||||||| Sbjct 28257 GAGCATCAA 28249 Score = 80.6 bits (88), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 18790 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggC 18849 ||||||| ||||| |||||| || ||||||||||||||||| |||||||||||||||| Sbjct 28249 TTGATGCTCGCCCC-GACATTAGCATCACGAGCGAAGCGAGTGATGCTGGTCGGGGGGGC 28307 Query 18850 AGGCATCAA 18858 ||||||| Sbjct 28308 GAGCATCAA 28316 >seq1 Length=8792355 Score = 80.6 bits (88), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 18790 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggC 18849 ||||||| ||||| |||||| || ||||||||||||||||| |||||||||||| ||| Sbjct 2337868 TTGATGCTCGCCCC-GACATTAGCATCACGAGCGAAGCGAGTGATGCTGGTCGGGGAGGC 2337810 Query 18850 AGGCATCAA 18858 | ||||||| Sbjct 2337809 AAGCATCAA 2337801 Score = 80.6 bits (88), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 20585 TTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGC 20644 ||||||| |||| |||||||||||| ||||||||||||||||| || |||||| ||||| Sbjct 2337801 TTGATGCTTGCCTCCCCGACCAGCATCACTCGCTTCGCTCGTGATGCTAATGTC-GGGGC 2337859 Query 20645 AGGCATCAA 20653 ||||||| Sbjct 2337860 GAGCATCAA 2337868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 83279656235775