Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq111 123 2e-23 seq89 93.3 4e-14 >seq111 Length=4850898 Score = 123 bits (136), Expect = 2e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 71671 AACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCA 71730 ||| |||||||| || ||||||||||| | ||| | || || ||||||||||| Sbjct 3861506 AACACATGATGATCTGTGGAATGCTGCAGAAATACAATTGGTAAAAGAAGGTAAAATTCA 3861565 Query 71731 CGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCA 71790 || | |||| ||||||||||||||||| ||||| || ||||| |||| || | | Sbjct 3861566 TGGCTTTTTACGTATGTACTGGGCCAAAAAAATTCTAGAATGGACCAAAACACCTCAAGA 3861625 Query 71791 GGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAA 71850 || ||||||| || |||||| | || |||| ||||||| | || || | ||||| || Sbjct 3861626 AGCACTCGAGTGGTCAATTTATTTGAATGATAAATACAGTATGGATGGAAGAGATCCCAA 3861685 Query 71851 CGGTTATGTCGGT 71863 |||||||| ||| Sbjct 3861686 TGGTTATGTTGGT 3861698 >seq89 Length=3244750 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| ||||| | || || ||| | ||||| | || | ||| | | Sbjct 1691664 ATGCAAATTTTTGTCAAAACTCTGACAGGTAAAACCATCACACTTGAGGTCGAAGCCTCC 1691605 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || || || ||| ||||||||||| || || || |||||| Sbjct 1691604 GACACAATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGAATTCCCCCAGATCAA 1691545 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ACGTCAGCGACTATA 26946 || | ||||||| || ||| ||||| || ||||| | | | | |||| ||||| | Sbjct 1691544 CAGCGTCTCATTTTCGCCGGAAAACAGCTTGAAGACGGTCGCACTTTGTCA--GACTACA 1691487 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 | |||||||| || || || | ||| | || || | ||||||||||| Sbjct 1691486 ATATTCAAAAGGAGTCGACACTGCATTTAGTATTGCGTCTTAGAGGAGG 1691438 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||| || || | ||||||||| | || || | ||| | ||| || Sbjct 1691209 AATGCAAATTTTTGTCAAGACCCTCACTGGAAAAACTATAACTCTTGAAGTCGAAGCATC 1691150 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || || | || ||| || ||| ||||||||||| || ||||| || || Sbjct 1691149 TGACACAATTGAAAATGTGAAAGCTAAAATTCAGGACAAAGAAGGCATCCCTCCAGACCA 1691090 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAACGTCAGCGACTAT 26945 || | | |||| | || |||||| | ||||||| | | | |||| || ||| Sbjct 1691089 GCAGCGTTTAATTTTTGCTGGTAAACAATTGGAAGATGGTCGCACATTGTCA--GATTAT 1691032 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| |||||||| || ||| | || |||| ||| | ||| | || || Sbjct 1691031 AACATCCAAAAAGAGTCAACTCTTCACTTGGTTCTGCGTCTTCGTGGTGG 1690982 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 |||||||| | ||||| || || | ||||| ||| | ||||| | || | || || Sbjct 1692123 AAAATGCAGATCTTTGTGAAGACGCTGACTGGTAAAACCATCACATTGGAGGTCGAGGCA 1692064 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 ||||||||| || | || || ||||||| |||||||| || || || || || Sbjct 1692063 TCCGACACCATTGAAAATGTTAAGGCAAAGATTCAAGACAAAGAGGGCATCCCCCCAGAC 1692004 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || ||| | || | | || || || |||||||||| | | | | || ||| Sbjct 1692003 CAGCAGAGATTGATCTTTGCAGGAAAGCAGCTCGAAGATGGACGCACCTTGTCTGATTAT 1691944 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| || ||||| || |||| || || || ||| | ||||| || Sbjct 1691943 AACATTCAGAAGGAATCCACACTCCACCTTGTACTCAGATTGAGAGGTGG 1691894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660263969040