Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq89 111 1e-19 seq256 86.0 5e-12 seq222 82.4 6e-11 >seq89 Length=3244750 Score = 111 bits (122), Expect = 1e-19 Identities = 154/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAA-CGGAGTCCA 115343 |||||||||||||||||| || ||||| |||||||| || || | ||| || || || Sbjct 1691209 AATGCAAATTTTTGTCAAGACCCTCACTGGAAAAACTATAACTCTTGAAGTCGAAG--CA 1691152 Query 115344 GC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 | ||||| ||| | | || ||| |||||| || ||||||||| |||| || Sbjct 1691151 TCTGACACAATTGAAAATGTGAAAGCTAAAATTCAGGACAAAGAAGGCATCCCTCCAGAC 1691092 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| | | |||| ||| || |||||||| ||||||| || || | |||||| Sbjct 1691091 CAGCAGCGTTTAATTTTTGCTGGTAAACAATTGGAAGATGGTCGCACATTGTCAGATTAT 1691032 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGT 115494 ||||| ||||||||||| ||| | || |||| Sbjct 1691031 AACATCCAAAAAGAGTCAACTCTTCACTTGGT 1691000 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 115281 TAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGT 115340 |||||||||| || ||||| || ||||| || || |||||||| || | || ||| Sbjct 1692125 TAAAAATGCAGATCTTTGTGAAGACGCTGACTGGTAAAACCATCACATTGGAGGTCGAGG 1692066 Query 115341 CCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400 | |||||| ||| | | || || ||| ||| || ||||| ||| ||||| | Sbjct 1692065 CATCCGACACCATTGAAAATGTTAAGGCAAAGATTCAAGACAAAGAGGGCATCCCCCCAG 1692006 Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460 | ||||| ||| | || | ||| || || || | ||||||| ||| || | |||| Sbjct 1692005 ACCAGCAGAGATTGATCTTTGCAGGAAAGCAGCTCGAAGATGGACGCACCTTGTCTGATT 1691946 Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||||| || || || || | || | || | |||||| |||| || Sbjct 1691945 ATAACATTCAGAAGGAATCCACACTCCACCTTGTACTCAGATTGAGAGGTGG 1691894 >seq256 Length=3517054 Score = 86.0 bits (94), Expect = 5e-12 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 ||||||||||| ||||| ||||| ||||| ||||||||||| ||| | || || | | Sbjct 131014 AAAATGCAAATCTTTGTGAAAACACTCACAGGAAAAACCATCACCCTTGAGGTTGA-TGC 130956 Query 115343 AGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 || |||| ||| | | || || ||||| ||||| ||||| | || || Sbjct 130955 GGCTGACAGCATTGAAAATGTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCCAGA 130896 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 ||||||||| | || | || || |||||||| ||||||| || || ||||||| Sbjct 130895 CCAGCAAAGATTGATCTTCGCCGGAAAACAATTGGAAGATGGACGTACATTGTCCGATTA 130836 Query 115462 TAACATTCAAAAAGAGTCTAC 115482 || ||||| || || ||||| Sbjct 130835 CAATATTCAGAAGGAATCTAC 130815 >seq222 Length=7060343 Score = 82.4 bits (90), Expect = 6e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||| |||||||| ||||| | || || || ||||| ||| | || ||| || Sbjct 1554051 AATATGCAGATTTTTGTTAAAACTTTGACTGGTAAGACCATCACCTTGGAGGTTGAGGCC 1553992 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 |||||| ||| | | || || ||||| ||||||||||| |||| ||| Sbjct 1553991 TCTGACACTATTGAAAATGTCAAGGCTAAAATCCAGGATAAAGAAGGAATCCCTCCAGAT 1553932 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATG 115442 ||||||||| | || | ||| || |||||||| ||||||| Sbjct 1553931 CAGCAAAGATTGATCTTTGCCGGTAAACAATTGGAAGATG 1553892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425342149354840