Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq89 125 7e-24 seq336 87.8 2e-12 seq56 84.2 2e-11 >seq89 Length=3244750 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||||||| ||||| | ||| |||||||| |||||||| ||||| Sbjct 1690526 CCACCACGCAGACGCAGCACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAATCTGAG 1690585 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| | |||||| || || | |||| |||||| ||||| |||||| Sbjct 1690586 AGTGTACGTCCATCCTCCAACTGCTTACCAGCAAAAATTAGACGCTGTTGGTCTGGAGGG 1690645 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| |||||| || | | ||| | ||||| | | || | Sbjct 1690646 ATACCTTCCTTGTCCTGGATTTTGGCTTTCACATTCTCAATGGTATCAGAAGCTTCAACC 1690705 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| ||||| || ||||| ||||| ||||||||||| Sbjct 1690706 TCCAAAGTGATGGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 1690752 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || || || | ||| ||||| |||||||| || || || | Sbjct 1691210 CCACCACGCAGACGGAGTACCAAGTGGAGGGTGGACTCTTTTTGAATATTATAGTCCGAC 1691269 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || | |||||| || || | |||||||||||||| || || ||| Sbjct 1691270 AATGTGCGACCATCTTCCAACTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGTGGG 1691329 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||||||||| ||| || ||||| | || | || || | || ||||| Sbjct 1691330 ATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCTGAGGCCTCGACT 1691389 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | |||| ||||||||| || | ||||| || || || |||||| || Sbjct 1691390 TCCAAAGTAATGGTTTTACCAGTCAATGTTTTAACAAAGATTTGCATGCCT 1691440 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078 ||||| |||||||| | ||||||||||||||||| ||||| || || ||||| Sbjct 1691449 ACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGACAAAGTGCGACC 1691508 Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 ||| || ||||| || || ||| | || | |||||| || || || || ||||||||||| Sbjct 1691509 GTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGAATTCCTTCTTT 1691568 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 ||| ||||| ||| | | || | || |||| || |||| || | || | Sbjct 1691569 GTCTTGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGACCTCAAGTGTGAT 1691628 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||||||| || |||||||| || ||||| ||||| Sbjct 1691629 GGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || || || | ||||||||||| || |||||||| || | Sbjct 1689820 CCACCACGCAGACGCAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGAC 1689879 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||| || || || |||| | ||||||||| || ||||| Sbjct 1689880 AGTGTGCGTCCATCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGA 1689939 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| || || ||||| | || | ||| |||| | || | Sbjct 1689940 ATGCCTTCTTTGTCTTGAATCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCACT 1689999 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || | || || || || |||||||| Sbjct 1690000 TCCAAGGTGATGGTCTTTCCTGTCAATGTCTTGACAAAGATCTGCAT 1690046 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| | ||||| || | || ||||| ||||| || ||||| || | Sbjct 1689592 CCACCCCGGAGACGTAATACTAAGTGAAGTGTAGACTCTTTTTGGATATTGTAGTC--TG 1689649 Query 131068 ATGGTGCGCGAG--TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 || | | ||| ||||| || |||||||| || | || |||||||||||||| |||| Sbjct 1689650 ATAGAGTACGACCATCCTCAAGTTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAG 1689709 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| ||||| ||||| ||| || || | | ||| | ||||| | | || | Sbjct 1689710 GGATACCTTCCTTGTCCTGGATCTTGGCTTTTACATTCTCAATGGTATCAGAAGCTTCAA 1689769 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| ||||| || ||||| || || ||||||||||| Sbjct 1689770 CCTCCAATGTGATGGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 1689818 Score = 91.5 bits (100), Expect = 1e-13 Identities = 111/150 (74%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | |||||| || || || | || ||||| ||||| ||||| ||||| Sbjct 1690981 GCCACCACGAAGACGCAGAACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATCTGA 1691040 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| || || | || || || || | ||||||||||||||||| ||||| Sbjct 1691041 CAATGTGCGACCATCTTCCAATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGG 1691100 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 ||| ||||||||||| ||| ||| |||| Sbjct 1691101 GATGCCTTCTTTGTC-CTGAATTTTAGCTT 1691129 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| | |||||||| | || ||||| || ||||| ||||| || Sbjct 1690754 CCACCTCGCAGACGTAATACTAAATGCAAAGTTGACTCTTTCTGAATATTGTAGTCAGAT 1690813 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| || || ||||| || |||| | |||||| ||||| || ||| Sbjct 1690814 AGAGTGCGACCATCCTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGTGGG 1690873 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTT-GAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| ||||| || ||| | | |||| || | || | ||| || | | || | Sbjct 1690874 ATTCCCTCTTTATCT-TGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCAAC 1690932 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | || || || || ||||| || || |||||||||||| Sbjct 1690933 CTCCAATGTGATAGTCTTGCCAGTCAGAGTCTTGACAAAAATCTGCATG 1690981 >seq336 Length=3726090 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 131047 TTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATT 131106 ||||| ||||||||||| | || || || |||| || || || || |||| Sbjct 1528382 TTTTGGATGTTGTAATCTTGGAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGATC 1528441 Query 131107 AAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCC 131166 || | ||||| |||||||| |||||||| || || |||||| ||||| | || Sbjct 1528442 AATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTTCA 1528501 Query 131167 ACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAA 131226 | |||||| | || |||| || | ||||| |||||||| || | |||||| || || Sbjct 1528502 ATAGTATCAGAGGCTTCGACCTCCAAGGTAATAGTTTTACCAGTCAAAGTTTTGACAAAG 1528561 Query 131227 ATCTGCAT 131234 |||||||| Sbjct 1528562 ATCTGCAT 1528569 >seq56 Length=4197193 Score = 84.2 bits (92), Expect = 2e-11 Identities = 122/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 145617 TATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTCCTC-GGCGTCGCTGTATTGT 145675 |||| || || || || |||||||||||||||||| || || || | | ||| ||| Sbjct 1121066 TATTAACAGCAATTGATGCCAAATTACAAACTGCCACTTCATCAGGTGATG-AGTACTGT 1121008 Query 145676 ACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTC 145735 || | ||| | || ||||| |||| | |||| || |||| |||||| ||||| ||| Sbjct 1121007 ACAACCTCAGTACATAAATTACTACTTCTGATTGTGCCCAAATTTTGTTGATTGGATTTA 1120948 Query 145736 CTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTG 145785 | || || || || ||||| | |||||| ||| ||||| || || || Sbjct 1120947 CGATTACAAGCATCTTTGTATAACATGTATGGTGTTCCAGTTTCTACTTG 1120898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010693642880