Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_008006.1 Length=10757 Score E Sequences producing significant alignments: (Bits) Value seq290 87.8 1e-13 seq304 82.4 5e-12 seq1 80.6 2e-11 seq339 78.8 6e-11 >seq290 Length=2072834 Score = 87.8 bits (96), Expect = 1e-13 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 3829 GGAACATATCGACGCTTCTTACGAATAGTAGCACGTTTGTATGTTATTTAGCATGTAAAC 3888 |||| |||||||||| ||||||||| ||||| | |||| || | | ||| || |||||| Sbjct 919369 GGAATATATCGACGCCTCTTACGAAAAGTAGGAAGTTTACATTTAACTTAACACGTAAAC 919310 Query 3889 GTGCTACTTTTTGTAAGAAGCGTCGATATGT 3919 |||||||| |||||| |||||||||||| Sbjct 919309 TACCTACTTTTCGTAAGAGGCGTCGATATGT 919279 Score = 78.8 bits (86), Expect = 6e-11 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 3832 ACATATCGACGCTTCTTACGAATAGTAGCACGTTTGTATGTTATTTAGCATGTAAACGTG 3891 |||||||||||| ||||||||| ||||| |||| ||||| | |||||||| | Sbjct 919279 ACATATCGACGCCTCTTACGAAAAGTAGGTAGTTTACGTGTTAAGTTAAATGTAAACTTC 919338 Query 3892 CTACTTTTTGTAAGAAGCGTCGATAT 3917 |||||||| |||||| |||||||||| Sbjct 919339 CTACTTTTCGTAAGAGGCGTCGATAT 919364 >seq304 Length=2969184 Score = 82.4 bits (90), Expect = 5e-12 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 3834 ATATCGACGCTTCTTACGAATAGTAGCACGTTTGTATGTTATTTAGCATGTAAACGTGCT 3893 |||||||||| ||||||||| ||||| | |||| || | | ||| || |||||| || Sbjct 2280333 ATATCGACGCCTCTTACGAAAAGTAGGAAGTTTACATTTAACTTAACACGTAAACTACCT 2280274 Query 3894 ACTTTTTGTAAGAAGCGTCGATATG 3918 |||||| |||||| ||||||||||| Sbjct 2280273 ACTTTTCGTAAGAGGCGTCGATATG 2280249 >seq1 Length=8792355 Score = 80.6 bits (88), Expect = 2e-11 Identities = 76/97 (78%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 3823 AATAAAGGAACATATCGACGCTTCTTACGAATAGTAGCACGTTTGTATGTTATTTAGCAT 3882 |||||| | ||||||||| | |||||| ||||||||| ||| || | | ||| | | Sbjct 8532722 AATAAATTATTATATCGACGTTCTTTACGAGTAGTAGCACTTTTCCATTTAAATTAACTT 8532663 Query 3883 GTAAACGTGCTACTTTTTGTAAGAAGCGTCGATATGT 3919 |||| |||||||| ||||||| ||||||||||||| Sbjct 8532662 ATAAATGTGCTACTCTTTGTAAAGAGCGTCGATATGT 8532626 >seq339 Length=931542 Score = 78.8 bits (86), Expect = 6e-11 Identities = 64/78 (82%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 3836 ATCGACGCTTCTTACGAATAGTAGCACGTTTGTATGTTATTTAGCATGTAAACGTGCTAC 3895 |||||||| ||||||||| ||||| | |||||| | ||| | |||||||| | |||| Sbjct 212823 ATCGACGCCTCTTACGAAAAGTAGGAAGTTTGTGTATTAAGTTAAATGTAAACTTCCTAC 212764 Query 3896 TTTTTGTAAGAAGCGTCG 3913 ||||||||||| |||||| Sbjct 212763 TTTTTGTAAGAGGCGTCG 212746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34307062213708