Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq89 152 4e-32 seq256 114 1e-20 seq222 109 5e-19 seq336 102 7e-17 >seq89 Length=3244750 Score = 152 bits (168), Expect = 4e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||| |||| |||||| |||||||| | || || || | || Sbjct 1691664 ATGCAAATTTTTGTCAAAACTCTGACAGGTAAAACCATCACACTTGAGGTCGAAGCCTCC 1691605 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || ||||| | |||| ||| ||||||||||| ||||| || || || Sbjct 1691604 GACACAATTGAAAACGTGAAGGCCAAAATTCAA-GACAAAGAAGGAATTCCCCCAGATCA 1691546 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | ||||| ||||| ||||| | ||||| | ||||||| || || ||||| Sbjct 1691545 ACAGCGTCTCATTTTCGCCGGAAAACAGCTTGAAGACGGTCGCACTTTGTCAGACTACAA 1691486 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||| || || || || |||||||| | | || |||||||| Sbjct 1691485 TATTCAAAAGGAGTCGACACTGCATTTAGTATTGCGTCTTAGAGGAGG 1691438 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| |||| || || |||| || | || || ||||| || Sbjct 1691892 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATTACCCTTGAGGTTGAGTCTTCA 1691833 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || ||||| ||| | ||| | |||| ||| || || || || |||||||| || || Sbjct 1691832 GATACTATTGAGAATGTTAAGGCCAAAATTCAA-GATAAGGAGGGAATTCCACCAGATCA 1691774 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | || ||||| || |||||||| ||||||| |||||| || |||||||| Sbjct 1691773 GCAGAGATTGATCTTTGCTGGAAAACAATTGGAAGATGGACGCACTCTGTCAGATTACAA 1691714 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| ||||||||||| || ||| | || || || | |||||||| Sbjct 1691713 CATTCAGAAAGAATCCACACTGCATCTTGTACTCAGATTGAGAGGAGG 1691666 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| |||| || || | |||||| | || || || | ||| Sbjct 1690980 ATGCAGATTTTTGTCAAGACTCTGACTGGCAAGACTATCACATTGGAGGTTGAAGCTTCT 1690921 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||||| || |||| |||| || | ||| || ||||| || || ||||| || Sbjct 1690920 GACACTATTGAAAATGTCA---AAGCTAAGATTCAA-GATAAAGAGGGAATCCCACCAGA 1690865 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||||| | || ||||| ||||||||| | || |||| ||||||| | || || Sbjct 1690864 CCAACAGCGTCTCATCTTTGCTGGCAAACAACTTGAGGATGGTCGCACTCTATCTGACTA 1690805 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||| ||||| || || | |||||||| || | || |||| || Sbjct 1690804 CAATATTCAGAAAGAGTCAACTTTGCATTTAGTATTACGTCTGCGAGGTGG 1690754 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || ||||| |||||| |||| || | ||||| ||| | || Sbjct 1691436 ATGCAAATCTTTGTTAAAACATTGACTGGTAAAACCATTACTTTGGAAGTCGAGGCCTCA 1691377 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| ||||||||||| || ||||| || || Sbjct 1691376 GACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAG 1691317 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | |||||||| || || || || ||||||| |||||| || || || ||| Sbjct 1691316 CAGCGTTTAATTTTTGCTGGTAAGCAGTTGGAAGATGGTCGCACATTGTCGGACTATAAT 1691257 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||||||| ||||| || || || || || Sbjct 1691256 ATTCAAAAAGAGTCCACCCTCCACTTGGTACT 1691225 Score = 127 bits (140), Expect = 2e-24 Identities = 158/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| ||||| | || || ||| | || || | ||||| || | || Sbjct 1691209 AATGCAAATTTTTGTCAAGACCCTCACTGGAAAAACTATAACTCTTGAAGTCGAAGCATC 1691150 Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||| || || |||| || |||| ||| ||||||||||| || || || |||| Sbjct 1691149 TGACACAATTGAAAATGTGAAAGCTAAAATTCAG-GACAAAGAAGGCATCCCTCCAGACC 1691091 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | |||||||| || |||||||| ||||||| |||||| || ||||| | Sbjct 1691090 AGCAGCGTTTAATTTTTGCTGGTAAACAATTGGAAGATGGTCGCACATTGTCAGATTATA 1691031 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || |||||||| || || || || || || || Sbjct 1691030 ACATCCAAAAAGAGTCAACTCTTCACTTGGTTCT 1690997 Score = 109 bits (120), Expect = 5e-19 Identities = 155/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || || ||||||| | |||||||| | || Sbjct 1690046 ATGCAGATCTTTGTCAAGACATTGACAGGAAAGACCATCACCTTGGAAGTGGAAGCTTCC 1689987 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||||| || |||| | || || | ||| ||||||||||| ||||| || || Sbjct 1689986 GACACTATTGAAAATGTCA---AGGCCAAGATTCAA-GACAAAGAAGGCATTCCTCCAGA 1689931 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||||| |||| ||||| || ||||| | ||||||| ||||| || || || Sbjct 1689930 TCAGCAGCGTCTTATCTTTGCTGGTAAACAGCTGGAAGATGGACGCACACTGTCTGACTA 1689871 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || || || || || || || || || || || Sbjct 1689870 CAACATCCAGAAGGAGTCGACTCTTCACTTGGTTCT 1689835 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || |||||||||||| | || ||||| ||||||| | || || || | ||| Sbjct 1690752 ATGCAGATTTTTGTAAAGACTCTTACTGGTAAGACCATCACTTTGGAGGTTGAAGCTTCT 1690693 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || ||| |||| |||||| ||||| ||||| || || || |||||| Sbjct 1690692 GATACCATTGAGAATGTGAAAGCCAAAATCCAGGACAAGGAAGGTATCCCTCCAGACCAA 1690633 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | |||||||| || || || || || |||| || || | ||||| || Sbjct 1690632 CAGCGTCTAATTTTTGCTGGTAAGCAGTTGGAGGATGGACGTACACTCTCAGATTATAAC 1690573 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || || || || ||||| ||||| Sbjct 1690572 ATTCAGAAGGAGTCAACCCTCCATTTGGTGCT 1690541 >seq256 Length=3517054 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| || || | || || ||| ||||||| | || || || || | Sbjct 131012 AATGCAAATCTTTGTGAAAACACTCACAGGAAAAACCATCACCCTTGAGGTTGATGCGGC 130953 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| |||||| || || ||||| ||||| || ||||| Sbjct 130952 TGACAGCATTGAAAATGTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCCAGACCA 130893 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || | | || || ||||| |||||||| ||||||| || || || ||||||||| Sbjct 130892 GCAAAGATTGATCTTCGCCGGAAAACAATTGGAAGATGGACGTACATTGTCCGATTACAA 130833 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||| || ||||| || || |||||||| || Sbjct 130832 TATTCAGAAGGAATCTACCCTTCATTTAGTCCT 130800 >seq222 Length=7060343 Score = 109 bits (120), Expect = 5e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || |||||||| ||||| ||||||| | || || ||| | ||| Sbjct 1554048 ATGCAGATTTTTGTTAAAACTTTGACTGGTAAGACCATCACCTTGGAGGTTGAGGCCTCT 1553989 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| || | ||| |||||| || |||||||| || || || || || Sbjct 1553988 GACACTATTGAAAATGTCAAGGCTAAAATCCAGGATAAAGAAGGAATCCCTCCAGATCAG 1553929 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | | || |||||||| |||||||| ||||||| ||| || | ||||||||| Sbjct 1553928 CAAAGATTGATCTTTGCCGGTAAACAATTGGAAGATGGTCGTACCCTTCAAGATTACAAT 1553869 Query 25179 ATTCAAAAAG 25188 || || |||| Sbjct 1553868 ATCCAGAAAG 1553859 >seq336 Length=3726090 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| || |||||||| |||||| | || || | || || || | || Sbjct 1528570 AATGCAGATCTTTGTCAAAACTTTGACTGGTAAAACTATTACCTTGGAGGTCGAAGCCTC 1528511 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||| ||||| || | ||| |||||| || || ||||| ||||| || || || Sbjct 1528510 TGATACTATTGAAAATGTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCCGGATCA 1528451 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || | | || ||||| || |||||||||||||||| ||| ||| | |||||||| Sbjct 1528450 GCAAAGATTGATCTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTCCAAGATTACAA 1528391 Query 25178 TATTCAAAAAG 25188 || ||||||| Sbjct 1528390 CATCCAAAAAG 1528380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326114616955