Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq34 352 3e-92 seq256 120 3e-22 seq347 105 7e-18 >seq34 Length=2688268 Score = 352 bits (390), Expect = 3e-92 Identities = 441/605 (73%), Gaps = 0/605 (0%) Strand=Plus/Plus Query 93116 TCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTG 93175 || || || || || | ||||||||||| || | ||||| | | ||||| ||||| Sbjct 1149188 TCATCGCGAGAAATTAGTTCATTGCTGAAAGTAAGTCCTGGCATTAAACCTCGCTTCTTC 1149247 Query 93176 AGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCC 93235 | ||||||||| | ||||||||||||| || || || ||||| || |||||||| || Sbjct 1149248 AACCAAAATATGGCAGCAAAACTACCACTGAAGAAAATTCCTTCAACAGCTGCAAAAGCT 1149307 Query 93236 ACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCT 93295 | || || || ||||| | || ||| |||||||| || | |||||| | ||| Sbjct 1149308 ATAACTCGCTCAGCAAATGTAGCACTCTTATGACTGATCCAGTTCATAGCCCAGTTAGCT 1149367 Query 93296 TTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAA 93355 || || ||| ||||||||| ||||| || || || || | ||| || | || | | Sbjct 1149368 TTCTTGGTAACACAAGGTAGAGTTTCAATTGCATTGAACAAGTAGTCCCTCTGAGATGGA 1149427 Query 93356 TCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCA 93415 || ||||| ||||| || | || ||||||||||| || || ||||| ||||| || Sbjct 1149428 TCAGTAATGTAGGTATCAATAAGAAGTGAATACATTTCTGAGTGCACATTTTCCATGGCT 1149487 Query 93416 ATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCT 93475 | |||||| || ||||| || | ||| || |||| || ||||| || |||| ||| Sbjct 1149488 ACTTGGAAGCCATAGAAGCAGCGAGCCTCAGTGACTTGAACTTCCTGGCTGAATCGCTCA 1149547 Query 93476 ACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATA 93535 ||||||||||||||||| || ||||| || || ||||| || || |||| ||| ||| Sbjct 1149548 ACGAGATTTTCATTGACAATGCCATCAGAGGCAGCAAAGAATGCTAATACATGAGAAATA 1149607 Query 93536 AAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACT 93595 ||||||||||| | || || | ||| |||||||| | ||| ||||| | || ||| Sbjct 1149608 AAATGTTTCTCGTTGTCATTCAACTTTGCCCAATCGTGCATATCCTTTGATAAGTCTACT 1149667 Query 93596 TCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATAT 93655 |||||||| |||||||| || || || ||||| |||||||| | ||| || || | || Sbjct 1149668 TCTTCGACCGTCCAAAATGAAGCCTCAGCTTTCTTGTACATGTGCCAAATATCAGGCCAT 1149727 Query 93656 TGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGTTGTGGG 93715 ||||| ||||| || || |||||| ||| || || || || || ||||| |||||||| Sbjct 1149728 TGAATGGGAAAGATCACGAAACGAGAAGGATTTTCCTTGAGCAATGGCTCCAGTTGTGGA 1149787 Query 93716 TCAAA 93720 ||||| Sbjct 1149788 TCAAA 1149792 Score = 89.7 bits (98), Expect = 6e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| || || || ||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 1148707 CATGACTCCCCACTTTTGGTATTCTCCAACTTTCTTTTCAAAGAAATTTGTCTTTCCTTC 1148766 Query 92850 CAAAGATAT 92858 ||| || || Sbjct 1148767 CAATGAAAT 1148775 >seq256 Length=3517054 Score = 120 bits (132), Expect = 3e-22 Identities = 82/90 (91%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGA 126320 |||| |||||||||||| |||||||||||||||||||||| |||||||||| || |||| Sbjct 608135 ACAGCTAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTCTGGGA 608076 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAAT 126350 ||||||||||||||||||||||| ||||| Sbjct 608075 GCGTGGGTTCGAACCCCACACCTAGCAAAT 608046 Score = 120 bits (132), Expect = 3e-22 Identities = 82/90 (91%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGA 126320 |||| |||||||||||| |||||||||||||||||||||| |||||||||| || |||| Sbjct 870624 ACAGCTAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTCTGGGA 870565 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAAT 126350 ||||||||||||||||||||||| ||||| Sbjct 870564 GCGTGGGTTCGAACCCCACACCTAGCAAAT 870535 Score = 116 bits (128), Expect = 4e-21 Identities = 77/83 (93%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGA 126320 |||| |||||||||||| |||||||||||||||||||||| |||||||||| || |||| Sbjct 870824 ACAGCTAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTCTGGGA 870765 Query 126321 GCGTGGGTTCGAACCCCACACCT 126343 ||||||||||||||||||||||| Sbjct 870764 GCGTGGGTTCGAACCCCACACCT 870742 >seq347 Length=8643572 Score = 105 bits (116), Expect = 7e-18 Identities = 70/75 (93%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326 |||||||||||| |||||||||||||||| ||||| |||||||||| || |||||||||| Sbjct 4128559 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGTTCTGGTTCCCGTCTGGGAGCGTGG 4128618 Query 126327 GTTCGAACCCCACAC 126341 ||||||||||||||| Sbjct 4128619 GTTCGAACCCCACAC 4128633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858315008680