Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq89 145 6e-30 seq256 114 1e-20 seq336 113 4e-20 seq123 98.7 8e-16 seq222 87.8 2e-12 seq1 84.2 2e-11 >seq89 Length=3244750 Score = 145 bits (160), Expect = 6e-30 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| |||||| | || |||||||| |||| ||||| || ||| || || Sbjct 1691664 ATGCAAATTTTTGTCAAAACTCTGACAGGTAAAACCATCACACTTGAGGTCGAAGCCTCC 1691605 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || |||||||||||||| || || ||||| || |||||| Sbjct 1691604 GACACAATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGAATTCCCCCAGATCAA 1691545 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || ||||| |||||| | || || ||||| | || || ||||| Sbjct 1691544 CAGCGTCTCATTTTCGCCGGAAAACAGCTTGAAGACGGTCGCACTTTGTCAGACTACAAT 1691485 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 |||||||| || || || | |||||||| ||||| Sbjct 1691484 ATTCAAAAGGAGTCGACACTGCATTTAGTATTGCG 1691450 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||| | || || || || | || ||||| || || | | Sbjct 1691892 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATTACCCTTGAGGTTGAGTCTTCA 1691833 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || ||||||||||| |||||||| |||||||| ||||| Sbjct 1691832 GATACTATTGAGAATGTTAAGGCCAAAATTCAAGATAAGGAGGGAATTCCACCAGATCAG 1691773 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || ||||| || || ||| ||||| | || ||||||||| Sbjct 1691772 CAGAGATTGATCTTTGCTGGAAAACAATTGGAAGATGGACGCACTCTGTCAGATTACAAC 1691713 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||||||||| | ||| | || | ||||| | |||||| Sbjct 1691712 ATTCAGAAAGAATCCACACTGCATCTTGTACTCAGATTGAGAGGAGGT 1691665 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||||||||| || || |||||||| | ||| | ||||| || || | Sbjct 1691436 ATGCAAATCTTTGTTAAAACATTGACTGGTAAAACCATTACTTTGGAAGTCGAGGCCTCA 1691377 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || || |||||||| || || || ||||| ||||| Sbjct 1691376 GACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAG 1691317 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||| || || ||||| || ||| ||||| | || || || || Sbjct 1691316 CAGCGTTTAATTTTTGCTGGTAAGCAGTTGGAAGATGGTCGCACATTGTCGGACTATAAT 1691257 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||||||||| |||||| | || || || | || |||| || || Sbjct 1691256 ATTCAAAAAGAGTCCACCCTCCACTTGGTACTCCGTCTGCGTGGTGG 1691210 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || |||| | ||||||||| | || Sbjct 1690046 ATGCAGATCTTTGTCAAGACATTGACAGGAAAGACCATCACCTTGGAAGTGGAAGCTTCC 1689987 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || ||||||||||| || || ||||| || ||||| Sbjct 1689986 GACACTATTGAAAATGTCAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCAGATCAG 1689927 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||| || |||||| | || ||| ||||| | || || |||||| Sbjct 1689926 CAGCGTCTTATCTTTGCTGGTAAACAGCTGGAAGATGGACGCACACTGTCTGACTACAAC 1689867 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || || ||| |||| |||| || ||| Sbjct 1689866 ATCCAGAAGGAGTCGACTCTTCACTTGGTTCTGCGTCTGCGTGGTGGT 1689819 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || | || || ||||| | ||||||||||| ||| | | Sbjct 1691208 ATGCAAATTTTTGTCAAGACCCTCACTGGAAAAACTATAACTCTTGAAGTCGAAGCATCT 1691149 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| |||||||| ||||| || || || || || || || Sbjct 1691148 GACACAATTGAAAATGTGAAAGCTAAAATTCAGGACAAAGAAGGCATCCCTCCAGACCAG 1691089 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||| || ||||| || || ||| ||||| | || ||||| ||| Sbjct 1691088 CAGCGTTTAATTTTTGCTGGTAAACAATTGGAAGATGGTCGCACATTGTCAGATTATAAC 1691029 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 || |||||||| || || | || || ||| |||| Sbjct 1691028 ATCCAAAAAGAGTCAACTCTTCACTTGGTTCTGCG 1690994 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||||||||| ||| | || ||||| || |||| | || || ||| | | Sbjct 1689818 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACCATCACATTGGAGGTTGAAGCTTCT 1689759 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | ||| || || || |||||||| ||||| || || || || Sbjct 1689758 GATACCATTGAGAATGTAAAAGCCAAGATCCAGGACAAGGAAGGTATCCCTCCAGACCAG 1689699 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||| ||||| || | |||||| || || | || || ||||| Sbjct 1689698 CAGCGTTTGATTTTTGCTGGCAAGCAACTTGAGGATGGTCGTACTCTATCAGACTACAAT 1689639 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 || |||||||| || || | || ||||| || || Sbjct 1689638 ATCCAAAAAGAGTCTACACTTCACTTAGTATTACG 1689604 Score = 98.7 bits (108), Expect = 8e-16 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 |||| ||||| || ||||| || || | || |||||||| |||| | || || || Sbjct 1692125 TAAAAATGCAGATCTTTGTGAAGACGCTGACTGGTAAAACCATCACATTGGAGGTCGAGG 1692066 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 | |||| ||| | || || | || ||| ||||||||||| ||||| || || || | Sbjct 1692065 CATCCGACACCATTGAAAATGTTAAGGCAAAGATTCAAGACAAAGAGGGCATCCCCCCAG 1692006 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 | || || | | || ||||| || || ||| | || ||| |||||| | || |||| Sbjct 1692005 ACCAGCAGAGATTGATCTTTGCAGGAAAGCAGCTCGAAGATGGACGCACCTTGTCTGATT 1691946 Query 22394 ACAACATTCAAAAAGAATCCAC 22415 | |||||||| || |||||||| Sbjct 1691945 ATAACATTCAGAAGGAATCCAC 1691924 >seq256 Length=3517054 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || |||||||| ||||| ||||| | || || ||||| |||| ||||| || || | Sbjct 131014 AAAATGCAAATCTTTGTGAAAACACTCACAGGAAAAACCATCACCCTTGAGGTTGATGCG 130955 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || | | | || || |||| ||||| ||||| ||||| || ||||| || || Sbjct 130954 GCTGACAGCATTGAAAATGTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCCAGAC 130895 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | | || || ||||| ||||| || || ||| || || | ||||||||| Sbjct 130894 CAGCAAAGATTGATCTTCGCCGGAAAACAATTGGAAGATGGACGTACATTGTCCGATTAC 130835 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| || ||||| ||| | |||||||| | || |||| || ||| Sbjct 130834 AATATTCAGAAGGAATCTACCCTTCATTTAGTCCTTCGTCTGCGTGGTGGT 130784 >seq336 Length=3726090 Score = 113 bits (124), Expect = 4e-20 Identities = 143/195 (73%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||| |||||||| || |||||||| | || | || || ||| || Sbjct 1528572 AAAATGCAGATCTTTGTCAAAACTTTGACTGGTAAAACTATTACCTTGGAGGTCGAAGCC 1528513 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || |||| ||||| ||||| ||||| || ||||| || ||| Sbjct 1528512 TCTGATACTATTGAAAATGTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCCGGAT 1528453 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCC--GATT 22393 || ||| | | || ||||| || ||||| ||||| ||| || || ||||| |||| Sbjct 1528452 CAGCAAAGATTGATCTTTGCTGGAAAACAATTAGAAGATGGTCGTAC--TCTCCAAGATT 1528395 Query 22394 ACAACATTCAAAAAG 22408 ||||||| ||||||| Sbjct 1528394 ACAACATCCAAAAAG 1528380 >seq123 Length=3260300 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||| ||||||||||| || || || | ||| | ||||| ||| | Sbjct 712317 AAAATGCAGATCTTTGTCAAAACTTTAACTGGCAAGACCATTACTTTGGAAGTTGAAGCT 712258 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || ||||| ||||| |||||||| ||||| ||||| || ||| Sbjct 712257 TCTGATACTATTGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGAATTCCTCCAGAT 712198 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCC--GATT 22393 || || | | || || || || ||||| || || ||| ||||| ||| | |||| Sbjct 712197 CAGCAGAGGTTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGCAC--TCTTCAAGATT 712140 Query 22394 ACAACATTCAAAAAG 22408 | || || ||||||| Sbjct 712139 ATAATATACAAAAAG 712125 >seq222 Length=7060343 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| ||||||||||||||||| || ||||| || |||| | || || || || Sbjct 1554051 AATATGCAGATTTTTGTTAAAACTTTGACTGGTAAGACCATCACCTTGGAGGTTGAGGCC 1553992 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | || || |||| ||||| || || || || || || || || ||| Sbjct 1553991 TCTGACACTATTGAAAATGTCAAGGCTAAAATCCAGGATAAAGAAGGAATCCCTCCAGAT 1553932 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | | || |||||||| ||||| || || ||| || ||| | |||||| Sbjct 1553931 CAGCAAAGATTGATCTTTGCCGGTAAACAATTGGAAGATGGTCGTACCCTTCAAGATTAC 1553872 Query 22396 AACATTCAAAAAG 22408 || || || |||| Sbjct 1553871 AATATCCAGAAAG 1553859 >seq1 Length=8792355 Score = 84.2 bits (92), Expect = 2e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || |||||||||||||||||||| ||||| || ||||| ||||||||||||| || | Sbjct 1064376 AAAATGCAAATTTTTGTTAAAACCTTAACTGGGAAAACCATCACTCTTGAAGTTGATGCG 1064435 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTA 22324 | ||| | | || || | ||| ||||| ||||||||||| |||| Sbjct 1064436 GCTGATTCGATTGAAAATGTTAAAGCCAAAATCCAAGACAAGGAAGGTA 1064484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726173789705