Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq89 170 4e-37 seq256 147 4e-30 seq336 132 9e-26 seq222 100 5e-16 >seq89 Length=3244750 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| || || ||||| || |||||||| || || || Sbjct 1689820 CCACCACGCAGACGCAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGAC 1689879 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | |||||||| | ||| || || || || || || | || || || || ||| Sbjct 1689880 AGTGTGCGTCCATCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGA 1689939 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||| |||||||||||||| |||||||| || || ||||| | | ||| ||| Sbjct 1689940 ATGCCTTCTTTGTCTTGAATCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCACT 1689999 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||| ||||| || | |||||||| || |||||||| Sbjct 1690000 TCCAAGGTGATGGTCTTTCCTGTCAATGTCTTGACAAAGATCTGCAT 1690046 Score = 163 bits (180), Expect = 5e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| |||| |||||||| || || ||||||||||||||||||||||| || Sbjct 1690982 CCACCACGAAGACGCAGAACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATCTGAC 1691041 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| | |||||||| || || || || || || || | | || ||||| || || Sbjct 1691042 AATGTGCGACCATCTTCCAATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGGG 1691101 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||| ||||| ||||| || || || || || || ||||| | || ||| ||| Sbjct 1691102 ATGCCTTCTTTGTCCTGAATTTTAGCTTTCACATTTTCAATTGTGTCAGATGCTTCGACT 1691161 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | || || |||||||| |||||||||||||| || || |||||| Sbjct 1691162 TCAAGAGTTATAGTTTTTCCAGTGAGGGTCTTGACAAAAATTTGCATT 1691209 Score = 156 bits (172), Expect = 8e-33 Identities = 161/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 68252 TACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTC 68311 ||| | ||| || ||||| || || || ||||||||||| || | || | |||||||| Sbjct 1691911 TACAAGGTGGAGTGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTGCGTCCATCTTC 1691970 Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371 | |||||| || || || || | ||| || ||||| || || ||||| || |||||||| Sbjct 1691971 GAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTG 1692030 Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 |||||||||||| || || |||||||| | || || || ||||| ||||||||||| Sbjct 1692031 AATCTTTGCCTTAACATTTTCAATGGTGTCGGATGCCTCGACCTCCAATGTGATGGTTTT 1692090 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || ||||| || || ||||||||| Sbjct 1692091 ACCAGTCAGCGTCTTCACAAAGATCTGCATT 1692121 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| ||||| || || || ||||| || || ||||||||||| ||| Sbjct 1690526 CCACCACGCAGACGCAGCACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAATCTGAG 1690585 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | ||||| || |||||||| || || || || || | |||||||| || || Sbjct 1690586 AGTGTACGTCCATCCTCCAACTGCTTACCAGCAAAAATTAGACGCTGTTGGTCTGGAGGG 1690645 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || || || || || || ||| ||||| || | | ||| || Sbjct 1690646 ATACCTTCCTTGTCCTGGATTTTGGCTTTCACATTCTCAATGGTATCAGAAGCTTCAACC 1690705 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || || || || ||||| || || |||||||| Sbjct 1690706 TCCAAAGTGATGGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 1690752 Score = 152 bits (168), Expect = 9e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || || || | ||||||||| || |||||||||||||| || ||||| || | Sbjct 1691208 TTCCACCACGCAGACGGAGTACCAAGTGGAGGGTGGACTCTTTTTGAATATTATAGTCCG 1691267 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | | ||| | |||||||| |||||||| || || || || | | || || || |||| Sbjct 1691268 ACAATGTGCGACCATCTTCCAACTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGTG 1691327 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || ||||| |||||||| ||||| |||||||| || || ||||||| | || | Sbjct 1691328 GGATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCTGAGGCCTCGA 1691387 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||||| || |||||||| || || | || || || || || ||||| Sbjct 1691388 CTTCCAAAGTAATGGTTTTACCAGTCAATGTTTTAACAAAGATTTGCAT 1691436 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | ||| |||||||| || || || || ||||| ||||| || || || || || Sbjct 1691438 CCTCCTCTAAGACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGAC 1691497 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || ||||| | ||| || |||||||| ||||| | ||||| || || ||| Sbjct 1691498 AAAGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGA 1691557 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| ||||||||||| || ||||| ||| || || ||||| | | ||| || Sbjct 1691558 ATTCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGACC 1691617 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||||| || || || || ||||| || || ||||| Sbjct 1691618 TCAAGTGTGATGGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 141 bits (156), Expect = 2e-28 Identities = 173/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 68226 TTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTA 68285 ||||| | ||| || || || || ||||| ||||| || || |||||||||||||| || Sbjct 1689583 TTTTACTGTCCACCCCGGAGACGTAATACTAAGTGAAGTGTAGACTCTTTTTGGATATTG 1689642 Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345 || || || || || | ||||| || | ||||| || || || || | | || ||| Sbjct 1689643 TAGTCTGATAGAGTACGACCATCCTCAAGTTGCTTGCCAGCAAAAATCAAACGCTGCTGG 1689702 Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 || || || || ||||||||||| || ||||| || || || ||| ||||| || | Sbjct 1689703 TCTGGAGGGATACCTTCCTTGTCCTGGATCTTGGCTTTTACATTCTCAATGGTATCAGAA 1689762 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||| || ||||| |||||||| || || || || ||||| || || |||||||| Sbjct 1689763 GCTTCAACCTCCAATGTGATGGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 1689818 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || ||||| || || | || |||||||| || || || || || || Sbjct 1690754 CCACCTCGCAGACGTAATACTAAATGCAAAGTTGACTCTTTCTGAATATTGTAGTCAGAT 1690813 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | || || || || || ||||| | |||||||| ||||| Sbjct 1690814 AGAGTGCGACCATCCTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGTGGG 1690873 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || || ||||||||||| || ||||| || || ||||| | | ||| || Sbjct 1690874 ATTCCCTCTTTATCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCAACC 1690933 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || || || || || |||||||| || |||||||| Sbjct 1690934 TCCAATGTGATAGTCTTGCCAGTCAGAGTCTTGACAAAAATCTGCAT 1690980 >seq256 Length=3517054 Score = 147 bits (162), Expect = 4e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || || || || || || || || || || || |||||||| Sbjct 130785 CCACCACGCAGACGAAGGACTAAATGAAGGGTAGATTCCTTCTGAATATTGTAATCGGAC 130844 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| | |||||||| || || || |||||||| || | |||||| ||||| || ||| Sbjct 130845 AATGTACGTCCATCTTCCAATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGAGGA 130904 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| ||||| || || |||||||| || ||| |||| || | || || Sbjct 130905 ATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTTCAATGCTGTCAGCCGCATCAACC 130964 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || | ||||||||||||||| ||||| || || || || || |||||| || Sbjct 130965 TCAAGGGTGATGGTTTTTCCTGTGAGTGTTTTCACAAAGATTTGCATTTTG 131015 >seq336 Length=3726090 Score = 132 bits (146), Expect = 9e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 68272 CTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATA 68331 ||||||||||||| ||||| ||| || | ||||||||||| || || || || || | Sbjct 1528380 CTTTTTGGATGTTGTAATCTTGGAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGA 1528439 Query 68332 TGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCT 68391 | | |||||| || || || ||||| |||||||| ||||| || || |||||||| | Sbjct 1528440 TCAATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTT 1528499 Query 68392 CGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 | || || || | | ||| || |||||||| || ||||| || || | || ||||| | Sbjct 1528500 CAATAGTATCAGAGGCTTCGACCTCCAAGGTAATAGTTTTACCAGTCAAAGTTTTGACAA 1528559 Query 68452 ATATCTGCATTATGCTAT 68469 | ||||||||| || ||| Sbjct 1528560 AGATCTGCATTTTGTTAT 1528577 >seq222 Length=7060343 Score = 100 bits (110), Expect = 5e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 68272 CTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATA 68331 |||| ||||| || ||||| || || | |||||||| || || || ||||| || | Sbjct 1553859 CTTTCTGGATATTGTAATCTTGAAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAGA 1553918 Query 68332 TGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCT 68391 | | |||||| || || || || || ||||| || || || || || |||||||| | Sbjct 1553919 TCAATCTTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGGATTTTAGCCTTGACATTTT 1553978 Query 68392 CGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 | || ||||| | | || || |||||||||||||| || || || | || || || | Sbjct 1553979 CAATAGTGTCAGAGGCCTCAACCTCCAAGGTGATGGTCTTACCAGTCAAAGTTTTAACAA 1554038 Query 68452 ATATCTGCAT 68461 | |||||||| Sbjct 1554039 AAATCTGCAT 1554048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921618287260040