Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq256 105 5e-18 seq89 98.7 7e-16 >seq256 Length=3517054 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 |||||||||||| ||| | |||||| | || || |||||||| ||| | || || || Sbjct 131015 CAAAATGCAAATCTTTGTGAAAACACTCACAGGAAAAACCATCACCCTTGAGGTTGATGC 130956 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 || || | | | || | ||| ||||| ||||| || || | ||| | | Sbjct 130955 GGCTGACAGCATTGAAAATGTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCCAGA 130896 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 ||| || ||| | ||||| || || |||||| | |||||| | || || ||||||| Sbjct 130895 CCAGCAAAGATTGATCTTCGCCGGAAAACAATTGGAAGATGGACGTACATTGTCCGATTA 130836 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||||||||||||||||||| |||||| | || | ||| | || || || Sbjct 130835 CAATATTCAGAAGGAATCTACCCTTCATTTAGTCCTTCGTCTGCGTGGTGG 130785 >seq89 Length=3244750 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || || | || ||||| ||||||||| | || || | || Sbjct 1691892 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATTACCCTTGAGGTTGAGTCTTCA 1691833 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || ||||| |||||| ||||| ||||| | || | | || Sbjct 1691832 GATACTATTGAGAATGTTAAGGCCAAAATTCAAGATAAGGAGGGAATTCCACCAGATCAG 1691773 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | ||||||||||| |||||| | |||||| | ||| || | |||||||| Sbjct 1691772 CAGAGATTGATCTTTGCTGGAAAACAATTGGAAGATGGACGCACTCTGTCAGATTACAAC 1691713 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||| ||||| || || ||| | ||| | | || ||||||| Sbjct 1691712 ATTCAGAAAGAATCCACACTGCATCTTGTACTCAGATTGAGAGGAGG 1691666 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || ||||| || || || ||||| ||| ||||| |||||| | Sbjct 1690046 ATGCAGATCTTTGTCAAGACATTGACAGGAAAGACCATCACCTTGGAAGTGGAAGCTTCC 1689987 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| || ||| || ||||| || | ||| | | || Sbjct 1689986 GACACTATTGAAAATGTCAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCAGATCAG 1689927 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| | |||||||||||||| ||||| || |||||| | || || | || ||||| Sbjct 1689926 CAGCGTCTTATCTTTGCTGGTAAACAGCTGGAAGATGGACGCACACTGTCTGACTACAAC 1689867 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || |||||||| || |||||||| |||| | ||| | || || || Sbjct 1689866 ATCCAGAAGGAGTCGACTCTTCACTTGGTTCTGCGTCTGCGTGGTGG 1689820 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 ||||||||||| | || | |||||||| | || |||||||||||||||||||| || Sbjct 1690887 GATAAAGAGGGAATCCCACCAGACCAACAGCGTCTCATCTTTGCTGGCAAACAACTTGAG 1690828 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| ||| | | || |||||||||||||| || || ||| | ||| | |||||| Sbjct 1690827 GATGGTCGCACTCTATCTGACTACAATATTCAGAAAGAGTCAACTTTGCATTTAGTATTA 1690768 Query 22047 CGTTTACGAGGAGG 22060 ||| | ||||| || Sbjct 1690767 CGTCTGCGAGGTGG 1690754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358123241821378