Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq112 107 5e-20 >seq112 Length=1966521 Score = 107 bits (118), Expect = 5e-20 Identities = 339/519 (65%), Gaps = 11/519 (2%) Strand=Plus/Plus Query 2974 TATTACCAATGGGTTTTCATCGTATTGTTCATCCAAGCGGTGTTCTTCTCCATTCCGCAG 3033 || ||||| ||||| | | || ||||| ||||||| | | |||| ||| |||| Sbjct 418452 TACTACCAGTGGGTCTGCTTCTGCCTGTTCTTCCAAGCCATCCTGTTCTACATACCGCGC 418511 Query 3034 TACATCTGGAAGGTATGTGAAGGAGGGAAAATGAAGA--CATTGGCTCATGATCTGACTT 3091 ||| |||||||| || || || || || || |||| | | |||| ||||| | | Sbjct 418512 TACCTCTGGAAGACCTGGGAGGGCGGCAAGATCAAGATGCTCTCGCTC--GATCTCAACT 418569 Query 3092 CACCGTTCCTGAGCAAAGAGTGCATCACAGAGAAGGTGGATCATTTGATGGATTATTTTT 3151 ||| | ||||| | || |||| || || | | | | | | | || ||| | | Sbjct 418570 GCCCGGTGGTGAGCGAGGACTGCAAGACCGACAGGAAGAAGCTGCTCGTCGACTATCTCT 418629 Query 3152 TCATGCAGCTGCACGCGCAAAACTCTTACGCCTACAAATACTTTGGCTGCGAGCTGCTAA 3211 | || | ||||| |||| |||| ||||| | | ||||| ||||||||| | || | Sbjct 418630 CCCTGAACATGCACTCGCAGAACTGGTACGCGTTCCGCTACTTCGGCTGCGAGTTTCTCA 418689 Query 3212 ACTTTGTCAACGTTGTCGCACAGATATGCTTCATGAATGCCTTTATAGGCGAAGACTTTT 3271 | | |||||||| || ||||| | | ||||| | ||| | | | | || || Sbjct 418690 ATCTCGTCAACGTCATCTGCCAGATCTTCCTCATGGACTACTTCCTCGACAACGAGTTCA 418749 Query 3272 TGTTGTACGGAATCTATGTTACCTTCTTCAACCAG--GAAGCCGCCCATCCGAACATGAC 3329 ||||| | | || | ||||| | || | |||| ||| ||| | Sbjct 418750 CCAACTACGGCCGCGACGTGCTCAGCTTCAGCGAGATGGAGCCCGAGGACCG--CAT--C 418805 Query 3330 GAACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCC 3389 || ||| ||| ||| ||||| || | |||| || || || ||||||| |||| | Sbjct 418806 GATCCC-ATGTCGCGGGTCTTCCCCAAGGTCACCAAGTGCACCTTCCACAAATTCGGTGC 418864 Query 3390 TTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGA 3449 ||| ||| | | |||| | ||| || || ||| | || || |||| | |||||||| Sbjct 418865 TTCCGGCACGGTTCAAAAGTTCGACGGCCTGTGCGTGCTGCCCCTGAACATCGTCAACGA 418924 Query 3450 GAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCT 3488 |||||||||| | |||||||||||||||||| | |||| Sbjct 418925 GAAGATCTACGTGTTCCTCTGGTTCTGGTTCATCCTGCT 418963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479951269500