Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq211 122 8e-23 >seq211 Length=1509898 Score = 122 bits (134), Expect = 8e-23 Identities = 144/193 (75%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 20270 AGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATAC 20329 || || ||| ||||||||| || || || |||| ||||||||| || | |||||| ||| Sbjct 51431 AGCGAGTAGGAGGCAATGTTGAAGGGCACCCCCAGACCCATGTCGCCGGCCCTCTGGTAC 51372 Query 20330 AGCTGACAGGAAAGCTCACCGT--CAGCTACATAAAATTGACATAACAAGTGACAGGGCG 20387 | |||||||| ||||| |||| ||| || ||||| || | | |||| ||||||| Sbjct 51371 AAGTGACAGGAGAGCTCGCCGTTGCAG--ACGTAAAACTGGGCCAGCGAGTGGCAGGGCG 51314 Query 20388 GAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGT 20447 | || |||||| || | ||| |||| ||||| || | ||| ||||| | ||| |||| Sbjct 51313 GCAGGGCCATCTTCGGGATGTCGACCGGATTCCAGGCGCTCATGATGATGCGTCTGTCGT 51254 Query 20448 GCGGATTATTTTT 20460 ||||||||||| Sbjct 51253 CGGGATTATTTTT 51241 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 20243 GTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCC 20302 |||| |||||| | |||||| || || | |||||| || || ||||| || || || Sbjct 53285 GTAATATGAGCTATCATATATGTCAATAAGGAATATGAAGCTATATTAAATGGTACACCA 53226 Query 20303 AAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAA 20362 | |||||||| | || ||||| || ||||| ||||| || || | ||| || ||| Sbjct 53225 AGTCCCATGTCAGCACTTCTTTGATAAAGTTGACAAGAAAGTTCTCCATTAGCAACGTAA 53166 Query 20363 AATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCAC 20422 || ||| || ||||| || || || ||||| | | | ||| || ||||| Sbjct 53165 AACTGAACCAATGCATGACAAGGTGGGAGAGCCATTATTGGAATGTCAATTGGATTCCAA 53106 Query 20423 GCACACATAATGATTCTTCTATCGTGCGGATTATTT 20458 || ||||||||||||||||||| | || |||||| Sbjct 53105 GCTGACATAATGATTCTTCTATCATCTGGTTTATTT 53070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441370830373880