Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq89 140 8e-28 seq336 123 6e-23 seq222 111 4e-19 seq256 104 6e-17 >seq89 Length=3244750 Score = 140 bits (154), Expect = 8e-28 Identities = 148/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| ||||| ||||| | | ||||| |||||||| | |||||||| ||||| Sbjct 1691474 TCCTTTTGAATATTGTAGTCTGACAAAGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAA 1691533 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || ||||||||||| ||||||| ||||||||||| || || ||||| || |||||| Sbjct 1691534 ATGAGACGCTGTTG---ATCTGGGGGAATTCCTTCTTTGTCTTGAATTTTGGCCTTCACG 1691590 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| || | ||| | ||| || || || ||||| || || || |||||||| ||| Sbjct 1691591 TTTTCAATTGTGTCGGAGGCTTCGACCTCAAGTGTGATGGTTTTACCTGTCAGAGTTTTG 1691650 Query 288460 ACGAATATCTGCAT 288473 || || || ||||| Sbjct 1691651 ACAAAAATTTGCAT 1691664 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || ||||| ||||| | || ||||| || || || | |||||| || || ||| Sbjct 1690790 TCTTTCTGAATATTGTAGTCAGATAGAGTGCGACCATCCTCAAGTTGTTTGCCAGCAAAG 1690849 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||||||||| ||||||||| |||||||| || || || ||||| || ||| Sbjct 1690850 ATGAGACGCTGTTGGTCTGGTGGGATTCCCTCTTTATCTTGAATCTTAGCTTTGACATTT 1690909 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || | ||| || || | ||||| ||||| || |||||||||||||| Sbjct 1690910 TCAATAGTGTCAGAAGCTTCAACCTCCAATGTGATAGTCTTGCCAGTCAGAGTCTTGACA 1690969 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 1690970 AAAATCTGCAT 1690980 Score = 132 bits (146), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 ||| ||||| ||||| | ||| |||||| || || || || || | || |||||||| Sbjct 1691677 TCTGAGTACAAGATGCAGTGTGGATTCTTTCTGAATGTTGTAATCTGACAGAGTGCGTCC 1691736 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTT 288377 ||||| ||||||||||| || ||||||| | ||| ||| ||| ||||| || || Sbjct 1691737 ATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGTGGAATTCCCTCCTT 1691796 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 ||| || ||||| || || || || || |||| ||| || || || || || || || Sbjct 1691797 ATCTTGAATTTTGGCCTTAACATTCTCAATAGTATCTGAAGACTCAACCTCAAGGGTAAT 1691856 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || |||||||||||||| || || ||||| Sbjct 1691857 GGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 1691892 Score = 118 bits (130), Expect = 3e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||||||||| ||||| || | | ||||| || ||||| |||||||| || || || Sbjct 1691018 TCTTTTTGGATGTTATAATCTGACAATGTGCGACCATCTTCCAATTGTTTACCAGCAAAA 1691077 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || | |||||| || ||| ||||| |||||||| ||||| ||||| |||||||| Sbjct 1691078 ATTAAACGCTGCTG---GTCTGGAGGGATGCCTTCTTTGTCCTGAATTTTAGCTTTCACA 1691134 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| || | || | ||| ||||| || || || || || || || || |||||| Sbjct 1691135 TTTTCAATTGTGTCAGATGCTTCGACTTCAAGAGTTATAGTTTTTCCAGTGAGGGTCTTG 1691194 Query 288460 ACGAATATCTGCATT 288474 || || || |||||| Sbjct 1691195 ACAAAAATTTGCATT 1691209 Score = 114 bits (126), Expect = 3e-20 Identities = 166/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 |||||||| ||||| | | ||| | |||| || |||||||||||||| ||||| Sbjct 1689589 TGTCCACCCCGGAGACGTAATACTAAGTGAAGTGTAGACTCTTTTTGGATATTGTAGTCT 1689648 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || || || || || || | ||| || || || || |||| |||||| || ||| Sbjct 1689649 GATAGAGTACGACCATCCTCAAGTTGCTTGCCAGCAAAAATCAAACGCTGCTG---GTCT 1689705 Query 288364 ---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||||| ||||| || |||||||| || ||||| || || || || | ||| | | Sbjct 1689706 GGAGGGATACCTTCCTTGTCCTGGATCTTGGCTTTTACATTCTCAATGGTATCAGAAGCT 1689765 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| ||||| || || |||||||| || || |||||||| Sbjct 1689766 TCAACCTCCAATGTGATGGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 1689818 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || ||||| || | ||| || ||||| || || || || || || || || Sbjct 1690562 TCCTTCTGAATGTTATAATCTGAGAGTGTACGTCCATCCTCCAACTGCTTACCAGCAAAA 1690621 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || ||||||||||| ||| ||||| ||||| || ||||||||||| |||||||| Sbjct 1690622 ATTAGACGCTGTTG---GTCTGGAGGGATACCTTCCTTGTCCTGGATTTTGGCTTTCACA 1690678 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| | ||| || || | ||||| ||||| || || |||||||| Sbjct 1690679 TTCTCAATGGTATCAGAAGCTTCAACCTCCAAAGTGATGGTCTTACCAGTAAGAGTCTTT 1690738 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 1690739 ACAAAAATCTGCAT 1690752 Score = 96.9 bits (106), Expect = 8e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | ||||| | || | ||| |||||||| ||||||||||| | Sbjct 1691209 TCCACCACGCAGACGGAGTACCAAGTGGAGGGTGGACTCTTTTTGAATATTATAGTCCGA 1691268 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | ||||| || ||||| || || || || || || || | |||||| ||| ||| Sbjct 1691269 CAATGTGCGACCATCTTCCAACTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGTGG 1691328 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||||||| || ||||| || || || || ||||| || | || | || || Sbjct 1691329 GATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCTGAGGCCTCGAC 1691388 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| | || || || || || |||| || || || || || ||||| Sbjct 1691389 TTCCAAAGTAATGGTTTTACCAGTCAATGTTTTAACAAAGATTTGCAT 1691436 >seq336 Length=3726090 Score = 123 bits (136), Expect = 6e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||||||||| || || || ||| || || || ||||||||||||||||| || |||| Sbjct 1528380 CTTTTTGGATGTTGTAATCTTGGAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGA 1528439 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 ||| | || ||| || |||||||| ||||| |||||||| || || || |||| Sbjct 1528440 TCAATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTT 1528499 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 | |||| ||| | ||| || || | || || || || || |||| ||| ||||| | Sbjct 1528500 CAATAGTATCAGAGGCTTCGACCTCCAAGGTAATAGTTTTACCAGTCAAAGTTTTGACAA 1528559 Query 288464 ATATCTGCATTATGTTAT 288481 | ||||||||| |||||| Sbjct 1528560 AGATCTGCATTTTGTTAT 1528577 >seq222 Length=7060343 Score = 111 bits (122), Expect = 4e-19 Identities = 141/193 (73%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| |||||||| || || || || || || ||||| |||||||| || || |||| Sbjct 1553859 CTTTCTGGATATTGTAATCTTGAAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAGA 1553918 Query 288344 TCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGT 288400 ||| | || ||| ||||| |||||||||||||||||||||||| || || || | Sbjct 1553919 TCAATCTTTGCTGA---TCTGGAGGGATTCCTTCTTTATCCTGGATTTTAGCCTTGACAT 1553975 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 |||| |||| || | || || || | ||||| ||||| || |||| ||| || | Sbjct 1553976 TTTCAATAGTGTCAGAGGCCTCAACCTCCAAGGTGATGGTCTTACCAGTCAAAGTTTTAA 1554035 Query 288461 CGAATATCTGCAT 288473 | || |||||||| Sbjct 1554036 CAAAAATCTGCAT 1554048 >seq256 Length=3517054 Score = 104 bits (114), Expect = 6e-17 Identities = 164/234 (70%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | ||||| || ||| || || ||||| || |||| Sbjct 130785 CCACCACGCAGACGAAGGACTAAATGAAGGGTAGATTCCTTCTGAATATTGTAATCGGAC 130844 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCT 288363 | || ||||| ||||| ||||||||||| |||||||||| | |||| | | | Sbjct 130845 AATGTACGTCCATCTTCCAATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGA--- 130901 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || |||||||| ||||| |||||||| || || || ||||| || || || || Sbjct 130902 GGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTTCAATGCTGTCAGCCGCATCA 130961 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || || ||||| || || || || || || || || || || |||||| || Sbjct 130962 ACCTCAAGGGTGATGGTTTTTCCTGTGAGTGTTTTCACAAAGATTTGCATTTTG 131015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179649004187046