Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq89 138 1e-27 seq123 109 5e-19 seq256 102 8e-17 seq336 100 3e-16 seq222 96.9 3e-15 seq56 95.1 1e-14 >seq89 Length=3244750 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||| ||| | ||||| || |||||||| ||||| |||| | ||||| |||||||| Sbjct 1691456 ACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGACAAAGTGCGACCGTCTTCA 1691515 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 ||||| || ||||| ||||||| ||||| || || || |||||||||||||| ||||| Sbjct 1691516 AGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGAATTCCTTCTTTGTCTTGA 1691575 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 ||||| ||| || || | ||| || ||| || || || | || | ||| || Sbjct 1691576 ATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGACCTCAAGTGTGATGGTTTTA 1691635 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || |||| |||||| || ||||||||||| Sbjct 1691636 CCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| || || ||||| | || |||||||| |||||||||||||||| Sbjct 1691665 ACCTCCTCTCAATCTGAGTACAAGATGCAGTGTGGATTCTTTCTGAATGTTGTAATCTGA 1691724 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||| | || || || ||| | || | | |||||| || || || Sbjct 1691725 CAGAGTGCGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGTGG 1691784 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||| || || ||||| ||||| ||| ||| ||| | ||||| | || || Sbjct 1691785 AATTCCCTCCTTATCTTGAATTTTGGCCTTAACATTCTCAATAGTATCTGAAGACTCAAC 1691844 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| |||| ||| || || || |||||||| Sbjct 1691845 CTCAAGGGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 1691892 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||||||||| || || || | | ||||| | ||||| | |||||| || Sbjct 1691240 GTGGACTCTTTTTGAATATTATAGTCCGACAATGTGCGACCATCTTCCAACTGCTTACCA 1691299 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| | |||||||| || || || ||||||||||| ||||| || || ||| Sbjct 1691300 GCAAAAATTAAACGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGGATCTTGGCCTTG 1691359 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||| || ||| || ||||| | ||| | ||| || || ||||| ||| Sbjct 1691360 ACATTTTCAATTGTGTCTGAGGCCTCGACTTCCAAAGTAATGGTTTTACCAGTCAATGTT 1691419 Query 64427 TTTACGAAAATTTGCAT 64443 || || || |||||||| Sbjct 1691420 TTAACAAAGATTTGCAT 1691436 Score = 111 bits (122), Expect = 2e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || |||||||| ||||| ||||||| | ||||| | ||||| | || Sbjct 1691006 TGAAGAGTTGACTCTTTTTGGATGTTATAATCTGACAATGTGCGACCATCTTCCAATTGT 1691065 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || ||| |||| | ||||||||||| ||||| || |||||||| || || | |||| Sbjct 1691066 TTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGGGATGCCTTCTTTGTCCTG-AATTTT 1691124 Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 ||||| ||| || | ||| ||| || || ||||| | ||||| || || || || Sbjct 1691125 AGCTTTCACATTTTCAATTGTGTCAGATGCTTCGACTTCAAGAGTTATAGTTTTTCCAGT 1691184 Query 64420 CAAAGTTTTTACGAAAATTTGCATT 64444 | || || || |||||||||||| Sbjct 1691185 GAGGGTCTTGACAAAAATTTGCATT 1691209 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||| |||| || || |||||||| || ||||| |||| | || || | || ||| Sbjct 1689610 ACTAAGTGAAGTGTAGACTCTTTTTGGATATTGTAGTCTGATAGAGTACGACCATCCTCA 1689669 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || |||||||| ||| |||| | ||||||||||| ||||| || ||||| || || || Sbjct 1689670 AGTTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGG 1689729 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 || || |||||| ||| | |||||| || || || || | || | |||||| Sbjct 1689730 ATCTTGGCTTTTACATTCTCAATGGTATCAGAAGCTTCAACCTCCAATGTGATGGTCTTA 1689789 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || | ||| || || ||||| ||||| Sbjct 1689790 CCAGTAAGAGTCTTAACAAAAATCTGCAT 1689818 >seq123 Length=3260300 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 7/207 (3%) Strand=Plus/Plus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 ||||||| || || |||||| | ||||| | ||||| | || || || || | | Sbjct 712125 CTTTTTGTATATTATAATCTTGAAGAGTGCGACCATCTTCCAATTGTTTACCAGCGAAGA 712184 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACC 64372 | | || |||||| || ||||||||||| ||||| ||||| | |||| ||||| ||| Sbjct 712185 TCAACCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGA-TTTTAGCTTTGACATTT 712243 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | |||||| || || ||||| | ||| | ||||||||| || |||||||| || Sbjct 712244 TCAATAGTATCAGAAGCTTCAACTTCCAAAGTAATGGTCTTGCCAGTTAAAGTTTTGACA 712303 Query 64433 AAAATTTGCATTTT-----AATAATGA 64454 || || |||||||| |||||||| Sbjct 712304 AAGATCTGCATTTTGCTAAAATAATGA 712330 >seq256 Length=3517054 Score = 102 bits (112), Expect = 8e-17 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| |||| ||||| || ||||| || ||||| |||||||| | Sbjct 130784 ACCACCACGCAGACGAAGGACTAAATGAAGGGTAGATTCCTTCTGAATATTGTAATCGGA 130843 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | ||||| | || || ||||| | || | | |||||||| ||||| Sbjct 130844 CAATGTACGTCCATCTTCCAATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGAGG 130903 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||| || ||||| ||||| ||| ||| || | | ||| | || || || Sbjct 130904 AATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTTCAATGCTGTCAGCCGCATCAAC 130963 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAAT 64449 || | || | ||| || || || | ||||| || || ||||||||||| || Sbjct 130964 CTCAAGGGTGATGGTTTTTCCTGTGAGTGTTTTCACAAAGATTTGCATTTTGAT 131017 >seq336 Length=3726090 Score = 100 bits (110), Expect = 3e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 ||||||| |||||||||||| || || || | ||||| | || || || ||| | | Sbjct 1528380 CTTTTTGGATGTTGTAATCTTGGAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGA 1528439 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373 | | | ||||| || |||||||||||||| || ||||| ||||| ||| ||| | Sbjct 1528440 TCAATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTT 1528499 Query 64374 CCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 | | |||||| ||| || || || | || | || || || ||||||||||| || | Sbjct 1528500 CAATAGTATCAGAGGCTTCGACCTCCAAGGTAATAGTTTTACCAGTCAAAGTTTTGACAA 1528559 Query 64434 AAATTTGCATTTT 64446 | || |||||||| Sbjct 1528560 AGATCTGCATTTT 1528572 >seq222 Length=7060343 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 |||| || || ||||||||| | ||| || | ||||| | || || |||||| | | Sbjct 1553859 CTTTCTGGATATTGTAATCTTGAAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAGA 1553918 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373 | | | ||||| || ||||| ||||||||||| || || ||||| ||| ||| | Sbjct 1553919 TCAATCTTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGGATTTTAGCCTTGACATTTT 1553978 Query 64374 CCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 | | || ||| ||| || || || | || | |||||| || ||||||||||| || | Sbjct 1553979 CAATAGTGTCAGAGGCCTCAACCTCCAAGGTGATGGTCTTACCAGTCAAAGTTTTAACAA 1554038 Query 64434 AAATTTGCATTTT 64446 |||| ||||| || Sbjct 1554039 AAATCTGCATATT 1554051 >seq56 Length=4197193 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 154058 ATACAAATTGCTGGTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGT 154117 ||| | ||| |||||| | ||||| | |||||||| || || | |||||| ||||| | Sbjct 1121749 ATAAATATTACTGGTGTAAGGCTCTATAGATTCGTTATTTCCAAGTATTTGTGCTGTCGA 1121690 Query 154118 TGCTGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAA 154177 ||| || ||||| || | | || || |||| || || | || ||||| Sbjct 1121689 TGCAGTAGGCATTGGTGCAAGAAGTAATGAATTTCTCACTCCATATTGAGCAATTTTTGC 1121630 Query 154178 TTTTAAATCTGCCCAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAA 154237 ||| ||| ||||||||| ||| | || ||||| ||||||||||||||| |||||||| Sbjct 1121629 TTTCAAAGCTGCCCAATCCCAGAGATTTGTAGGAGTCACGTTCCACATGTCATATTGCAA 1121570 Query 154238 AA 154239 || Sbjct 1121569 AA 1121568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642570335080